[3dem] Continue a relion 3D auto-refine job

[Zongli Li]

Dear all,

Please ignore my previous email. I made a mistake in command line with "
--i " in between, which should not be there when using --continue option.

Sorry!

Best,

Zongli

On Sat, Dec 9, 2017 at 1:26 PM, Zongli Li <zongli.li at gmail.com> wrote:

> Dear lists,
>
> I am trying to continue a relion 3D auto-refine job but have the following
> errors:
>
> ERROR:
>
> MlOptimiser::readStar: File --i cannot be read.
>
> File: /programs/x86_64-linux/relion/2.1b1_cu9.0/src/ml_optimiser.cpp
> line: ERROR:
>
> MlOptimiser::readStar: File --i cannot be read.
>
> File: /programs/x86_64-linux/relion/2.1b1_cu9.0/src/ml_optimiser.cpp
> line: 676
>
> ERROR:
>
> MlOptimiser::readStar: File --i cannot be read.
>
> File: /programs/x86_64-linux/relion/2.1b1_cu9.0/src/ml_optimiser.cpp
> line: 676
>
> ERROR:
>
> MlOptimiser::readStar: File --i cannot be read.676
>
> ERROR:
>
> MlOptimiser::readStar: File --i cannot be read.
>
>
> The relion version is 2.1b1_cu9.0. I used "--continue. --I
> Refine3D/job001/run_it017_optimiser.star ".
>
> The --continue is not listed in the option list, not sure if it still
> valid.
>
> I also tried to continue the job through GUI but the input button for
> continue job is grayed out.
>
> Any suggestions would be highly appreciated!
>
> Best,
>
> Zongli
>
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