[3dem] CryoSPARC v4 Stable Release

Ali Punjani alipunjani at cs.toronto.edu
Wed Mar 15 10:03:50 PDT 2023


Dear 3DEM,

We are pleased to announce the stable release of CryoSPARC v4, available
today as v4.2.1. Thank you to all users and testers during the private and
public beta periods.

Version 4 includes:

   - A fully re-designed web application interface to support more complex
   and performant workflows, including new interactive jobs for curating and
   inspecting data, a filtering and tagging system for organizing projects and
   jobs, integrated CryoSPARC Live, integrated 3D volume viewer, and more.
   - 3DFlex (BETA)
   <https://urldefense.com/v3/__https://guide.cryosparc.com/processing-data/tutorials-and-case-studies/tutorial-3d-flexible-refinement__;!!Mih3wA!EOkZuuIALzxAHzrIjYj1ZqrDGOytr9ENngXszTEMGzBRfwTDaFrYWKP3u_YMy5uf0e0lVJ0gYwv1Ar18cb4M471aDxeL$ >,
   a motion-based deep generative model for continuous heterogeneity that
   models non-rigid motion and flexibility of a protein molecule.
   - cryosparc-tools <https://urldefense.com/v3/__https://tools.cryosparc.com/intro.html__;!!Mih3wA!EOkZuuIALzxAHzrIjYj1ZqrDGOytr9ENngXszTEMGzBRfwTDaFrYWKP3u_YMy5uf0e0lVJ0gYwv1Ar18cb4M4woPiU8v$ >, an
   open-source Python library that provides advanced scripting access to
   CryoSPARC metadata and outputs.
   - Major improvements in project and data management systems, cluster
   integration, report generation, installation tests, and more.


Please see our v4 application walkthrough video
<https://urldefense.com/v3/__https://youtu.be/b9UD7_GGZas__;!!Mih3wA!EOkZuuIALzxAHzrIjYj1ZqrDGOytr9ENngXszTEMGzBRfwTDaFrYWKP3u_YMy5uf0e0lVJ0gYwv1Ar18cb4M45sfDTsv$ > and comprehensive guide
<https://urldefense.com/v3/__https://guide.cryosparc.com/application-guide-v4.0*/a-tour-of-the-cryosparc-interface__;Kw!!Mih3wA!EOkZuuIALzxAHzrIjYj1ZqrDGOytr9ENngXszTEMGzBRfwTDaFrYWKP3u_YMy5uf0e0lVJ0gYwv1Ar18cb4M4_Z41WT_$ >.
A detailed changelog is available at cryosparc.com/updates.

Thank you!
The CryoSPARC Team <https://urldefense.com/v3/__https://structura.bio/*team__;Iw!!Mih3wA!EOkZuuIALzxAHzrIjYj1ZqrDGOytr9ENngXszTEMGzBRfwTDaFrYWKP3u_YMy5uf0e0lVJ0gYwv1Ar18cb4M488dheM3$ >
Structura Biotechnology Inc <https://urldefense.com/v3/__https://structura.bio/__;!!Mih3wA!EOkZuuIALzxAHzrIjYj1ZqrDGOytr9ENngXszTEMGzBRfwTDaFrYWKP3u_YMy5uf0e0lVJ0gYwv1Ar18cb4M4zpdJPXP$ >.
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