[3dem] EMAN2

Eric Hanssen ehanssen at unimelb.edu.au
Wed Sep 19 00:40:14 PDT 2018


Hi all,
I am trying to convert a bunch of .tif file (each a stack of 25 frames) to .mrc files. why would anyone save as tif instead of mrc I beyond me but lets not dwelve in this .
I ran:
e2proc2d.py *.tiff @.mrc

but then get this error message:

1 images, processing 0-0 stepping by 1
Traceback (most recent call last):
  File "/home/bio21em1/EMAN2/bin/e2proc2d.py", line 1158, in <module>
    main()
  File "/home/bio21em1/EMAN2/bin/e2proc2d.py", line 583, in main
    d.read_image(infile, i)
  File "/home/bio21em1/EMAN2/lib/EMAN2db.py", line 439, in db_read_image
    return self.read_image_c(fsp,*parms, **kparms)
RuntimeError: InvalidValueException at /home/bio21em1/Downloads/eman2-master/libEM/emdata_metadata.cpp:844: error with '0': 'y size <= 0' caught

Thoughts?
Regards
Eric

-----------------
Assoc. Prof Eric Hanssen

Head - Advanced Microscopy Facility
Honorary Principal Fellow - Department of Biochemistry and Molecular Biology

Bio21 Molecular Science and Biotechnology Institute
30 Flemington Road - The University of Melbourne - Victoria 3010 - Australia
email: ehanssen at unimelb.edu.au<mailto:ehanssen at unimelb.edu.au> | Office: +61 3 83442449 | Microscope: +61 3 83442509
Web: www.microscopy.unimelb.edu.au<http://www.microscopy.unimelb.edu.au/>
[qqwd]


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