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<p class="MsoNormal">Hi all, <o:p></o:p></p>
<p class="MsoNormal">I am trying to convert a bunch of .tif file (each a stack of 25 frames) to .mrc files. why would anyone save as tif instead of mrc I beyond me but lets not dwelve in this .
<o:p></o:p></p>
<p class="MsoNormal">I ran:<o:p></o:p></p>
<p class="MsoNormal">e2proc2d.py *.tiff @.mrc<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">but then get this error message:<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">1 images, processing 0-0 stepping by 1<o:p></o:p></p>
<p class="MsoNormal">Traceback (most recent call last):<o:p></o:p></p>
<p class="MsoNormal"> File "/home/bio21em1/EMAN2/bin/e2proc2d.py", line 1158, in <module><o:p></o:p></p>
<p class="MsoNormal"> main()<o:p></o:p></p>
<p class="MsoNormal"> File "/home/bio21em1/EMAN2/bin/e2proc2d.py", line 583, in main<o:p></o:p></p>
<p class="MsoNormal"> d.read_image(infile, i)<o:p></o:p></p>
<p class="MsoNormal"> File "/home/bio21em1/EMAN2/lib/EMAN2db.py", line 439, in db_read_image<o:p></o:p></p>
<p class="MsoNormal"> return self.read_image_c(fsp,*parms, **kparms)<o:p></o:p></p>
<p class="MsoNormal">RuntimeError: InvalidValueException at /home/bio21em1/Downloads/eman2-master/libEM/emdata_metadata.cpp:844: error with '0': 'y size <= 0' caught<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Thoughts? <o:p></o:p></p>
<p class="MsoNormal">Regards<o:p></o:p></p>
<p class="MsoNormal">Eric<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:navy;mso-fareast-language:EN-AU">-----------------<o:p></o:p></span></b></p>
<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:navy;mso-fareast-language:EN-AU">Assoc. Prof Eric Hanssen<o:p></o:p></span></b></p>
<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:navy;mso-fareast-language:EN-AU"><o:p> </o:p></span></b></p>
<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:#1F497D;mso-fareast-language:EN-AU">Head - Advanced Microscopy Facility
</span></b><b><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:#1F497D;mso-fareast-language:EN-AU"><o:p></o:p></span></b></p>
<p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:#1F497D;mso-fareast-language:EN-AU">Honorary Principal Fellow – Department of Biochemistry and Molecular Biology<o:p></o:p></span></b></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:#1F497D;mso-fareast-language:EN-AU"><br>
Bio21 Molecular Science and Biotechnology Institute<br>
</span><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:gray;mso-fareast-language:EN-AU">30 Flemington Road - The University of Melbourne - Victoria 3010 - Australia<br>
email: </span><span style="color:#1F497D;mso-fareast-language:EN-AU"><a href="mailto:ehanssen@unimelb.edu.au"><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:gray">ehanssen@unimelb.edu.au</span></a></span><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:gray;mso-fareast-language:EN-AU">
| Office: +61 3 83442449 | Microscope: +61 3 83442509 <o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Comic Sans MS";color:gray;mso-fareast-language:EN-AU">Web:
<a href="http://www.microscopy.unimelb.edu.au/">www.microscopy.unimelb.edu.au</a><o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-AU"><img border="0" width="624" height="290" id="Picture_x0020_1" src="cid:image001.png@01D4503F.D282DBA0" alt="qqwd"><o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-AU"><o:p> </o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
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