[3dem] Particles.star file in Tomo Relion

Mirgaux Manon manon.mirgaux at ulb.be
Mon Feb 5 23:50:50 PST 2024


Dear all,

Trying to process cryo-tomography data for the first time to do sub-tomogram averaging, I have trouble when importing. Indeed, after having done the Relion tutorial without any trouble and having aligned my micrographs on etomo, I noticed that I need an order_list file and a particles.star file. Although I can write the order file myself, I can't figure out how to generate the particles.star file. I'd be very grateful if someone could help me to clarify this procedure.

Best regards,

Manon Mirgaux


Manon Mirgaux, PhD

Expert Scientist in Electron Microscopy (Cryo-EM, TEM, SEM)



Center for Microscopy and Molecular Imaging (CMMI)



[cid:d77b1a8d-0967-41a6-8c66-1eee1e2c19ff]

Rue Adrienne Bolland 8 B-6041 Gosselies, Belgium

Tel : +32(0)26509931 GSM: +32(0)470692523

Website: https://urldefense.com/v3/__http://www.cmmi.be__;!!Mih3wA!Hp7U9mg_2CpY8OXI3YOf8ohfIGh47ZVkE_VNbVRGGzrQpHk6fXk0RcC53pdeQ6qm5d0R4MZFdioazz_crHQYM0Sg4Q$ <https://urldefense.com/v3/__http://www.cmmi.be__;!!Mih3wA!Hp7U9mg_2CpY8OXI3YOf8ohfIGh47ZVkE_VNbVRGGzrQpHk6fXk0RcC53pdeQ6qm5d0R4MZFdioazz_crHQYM0Sg4Q$ >



En télétravail le vendredi - joignable par email, par Teams ou par téléphone (GSM)

[cid:e12ca72e-4eb6-4e1e-8f00-a77de3314aa4]


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ncmir.ucsd.edu/pipermail/3dem/attachments/20240206/31aaaf4b/attachment-0001.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: Outlook-jdgj0kvu.png
Type: image/png
Size: 33356 bytes
Desc: Outlook-jdgj0kvu.png
URL: <http://mail.ncmir.ucsd.edu/pipermail/3dem/attachments/20240206/31aaaf4b/attachment-0002.png>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: Outlook-k0m0h0fg.png
Type: image/png
Size: 24087 bytes
Desc: Outlook-k0m0h0fg.png
URL: <http://mail.ncmir.ucsd.edu/pipermail/3dem/attachments/20240206/31aaaf4b/attachment-0003.png>


More information about the 3dem mailing list