[3dem] 3dem Digest, Vol 144, Issue 31

Ben Engel engelben at biochem.mpg.de
Fri Aug 23 06:51:25 PDT 2019


Hi Sara,

Well, I can only speak for myself, but I say thank you for highlighting
this issue.  I think that open conversation of issues that face our
community is very important.  And I think that the 3DEM mailing list is
indeed a good place to bring such issues to the attention of the community.

Best,
Ben

On Fri, Aug 23, 2019 at 3:16 AM Sara Sandin <SSandin at ntu.edu.sg> wrote:

> Dear Ben,
>
> I didn’t want to start an email chain.
>
> Just highlight the challenges for our students and conference organizers.
>
> Twitter has its limitations and advantages. 3dEM a smaller community,
> which is good. Overall, as scientists I think it’s important to highlight
> these problems.
>
> Borders are not good for science.
>
> Best wishes from Singapore,
> Sara
>
> ----
> Sara Sandin, PhD
> NTU Institute of Structural Biology (NISB)
> Assistant Professor, School of Biological Sciences (SBS)
> Deputy Director, Facility for Analysis Characterisation Testing &
> Simulation (FACTS)
> NTU Singapore
> ------------------------------
> *From:* Ben Engel <engelben at biochem.mpg.de>
> *Sent:* 23 August 2019 16:56:19
> *To:* Natesh Ramanathan <natesh at iisertvm.ac.in>
> *Cc:* Angela Kirykowicz <angela.kirykowicz at gmail.com>; Sara Sandin <
> SSandin at ntu.edu.sg>; 3dem at ncmir.ucsd.edu <3dem at ncmir.ucsd.edu>
> *Subject:* Re: [3dem] 3dem Digest, Vol 144, Issue 31
>
> I was finding this conversation interesting, as conference Visas are an
> important topic (related-- I often think about how Visa policies make it
> hard/impossible for scientists born in certain countries to attend Gordon
> conferences in the USA, and I ponder what we can do about it).  But I
> understand that India-Pakistan is a very sensitive subject right now, and
> thus let's let this email chain die.   We could always start a discussion
> thread on #twitter  ...what could possibly go wrong?  ;P
>
> Open world, open science,
> Ben :)
>
> On Fri, Aug 23, 2019 at 1:05 AM Natesh Ramanathan <natesh at iisertvm.ac.in>
> wrote:
>
> Dear Angela,
>
>           No. We had given the required document clearance for many
> participants around the world and there were participants from USA,
> Germany, France, Poland, Spain, Italy, UK who got visa on time and they
> attended the courses.     Also, many speakers all around the world came
> with the required papers we sent to them.  We had given you the same
> papers.  So it is not a problem specific to India.   What went wrong in
> your case should be discussed not in 3dem group, I guess.
>
>           Again, the last-minute visa is not specific to India.  I and my
> friends have got a conference/short term visit Visa for many countries in
> the last minute as you say.  I have particularly experienced that with few
> countries.
>
>          I think it is not a good idea to discuss these few issues in the
> 3dem public group.  I think we should discuss only the science here.  Sorry
> I had to reply for other emails as you had raised an issue in a public
> forum and I had to clarify it.   I hope we can discuss only the science
> here.    Any concerns please write to me in person and not to 3dem.
>
>          Many thanks.
>
> Best regards,
> Natesh
>
> On Fri, 23 Aug 2019 at 13:04, Angela Kirykowicz <
> angela.kirykowicz at gmail.com> wrote:
>
> Dear Natesh,
>
> No, it's not just a problem in general, but a problem in India
> specifically for anyone who wants to attend a conference/workshop. I had
> the same issue last year: I couldn't even apply for a visa to attend the
> 3DEM workshop because I was not given the correct "political clearance"
> certificate by the organisers required by attendees. This lead to me losing
> money for the plane ticket I had booked, not to mention weeks of
> frustration as I was ping ponged between the visa application office,
> frantic emails to the organisers (who insisted that I was given the correct
> document), and the Indian consulate in South Africa (who promised to look
> into the issue & never got back to me). Frankly, I have never heard of such
> a requirement in any country (certainly not a Western one) in order for
> someone to attend a conference. It also seems to be standard practice for
> visas to India to be issued at the last minute, leading to considerable
> stress for anyone who wants to visit. Either the government should get rid
> of this ridiculous requirement or conference/workshop organisers should
> seriously reconsider hosting events like these in India.
>
>
> That's just my two cents.
>
> Angela
>
> On Fri, Aug 23, 2019 at 4:17 PM Natesh Ramanathan <natesh at iisertvm.ac.in>
> wrote:
>
> Dear Gabor and Sara,
>
>              Indeed it is a big problem for scientists not only in India
> but it happens throughout the world.    I have heard similar stories from
> scientists in India for conference visa application to USA and other
> countries around the world, ultimately as you said wasting a lot of time
> and money.
>
>            I wish the situation improves for scientists around the world.
>
>           I hope a day will come when scientists can go to conferences in
> other countries without visas ..!!  I guess some countries have that
> already.
>
> Best regards,
> Natesh
>
>
> On Thu, 22 Aug 2019 at 23:40, Gabor Herman <gabortherman at yahoo.com> wrote:
>
> Just a comment about my related experience.
> I was invited as a plenary speaker by a conference in Kolkata in 2015.
> Although I still do not really understand why I failed to get a visa
> since I followed all instructions to the letter, this is my impression:
> I applied for a "Conference Visa" and the material provided by
> the organizers in Kolkata was incomplete for obtaining
> such a visa, at least according to the people at the official visa office
> of
> the Indian Consulate in New York. I was not able to find out what it was
> that
> was missing, either from the consulate people or the organizers in Kolkata.
> So I ended up not going. It has cost me a lot of time and money (for
> touristic
> plans prior and after the conference that I already booked, not expecting
> any problems). I guess that this is an Indian thing that I do not
> understand.
>
>
> Gabor T. Herman, Ph.D.
> Professor Emeritus
> Ph.D. Computer Science Program
> The Graduate Center
> City University of New York
> Web-Page: http://gabor.ws.gc.cuny.edu/
> .
> ==========================================
> .
> A new and improved version of
> .
> SNARK14 (a programming system for the reconstruction of 2D images from 1D
> projections)
> is available for downloading from
> http://turing.iimas.unam.mx/SNARK14M
> .
>
>
> On Thursday, August 22, 2019, 1:41:00 PM EDT, Natesh Ramanathan <
> natesh at iisertvm.ac.in> wrote:
>
>
> Dear Sara,
>           Yes "Applicants from all over the world are encouraged to
> apply".  I understand the disappointment and completely agree, but in the
> end, only the officers at the Embassy have the visa issuing authority and
> each country has its restrictions.  We had put our best efforts from our
> side with required papers for visa purpose, but ultimately the Embassy
> officers are the decision-makers.
>            Hope you understand that it was a situation beyond our control.
> Best regards,
> Natesh
>
> On Thu, 22 Aug 2019 at 22:40, Sara Sandin <SSandin at ntu.edu.sg> wrote:
>
> Despite the
>
>
> "Applicants from all over the world are encouraged to apply"
>
>
> I would like to highlight that my graduate student from Pakistan, working
> in Singapore, did not get a visa to attend the workshop last round.
>
>
> Disappointing and not good for science. I hope you do better this year,
>
> Sara
>
> ----
> Sara Sandin, PhD
> NTU Institute of Structural Biology (NISB)
> Assistant Professor, School of Biological Sciences (SBS)
> Deputy Director, Facility for Analysis Characterisation Testing &
> Simulation (FACTS)
> NTU Singapore
> WEB http://sarasandinlab.com
> <https://webmail.ntu.edu.sg/owa/redir.aspx?C=NowMSA1uEU28_-tbNZ04OFa6tI6xfNUIBfsPqR4p_Q-eM0bDbGMdyiaZIscRauGtU1W3TiKFiEk.&URL=http%3a%2f%2fsarasandinlab.com>
>   NISB http://nisb.ntu.edu.sg
> <https://webmail.ntu.edu.sg/owa/redir.aspx?C=NowMSA1uEU28_-tbNZ04OFa6tI6xfNUIBfsPqR4p_Q-eM0bDbGMdyiaZIscRauGtU1W3TiKFiEk.&URL=http%3a%2f%2fnisb.ntu.edu.sg%2fPages%2fHome.aspx>
> FACTS http://research.ntu.edu.sg/facts
> <https://webmail.ntu.edu.sg/owa/redir.aspx?C=NowMSA1uEU28_-tbNZ04OFa6tI6xfNUIBfsPqR4p_Q-eM0bDbGMdyiaZIscRauGtU1W3TiKFiEk.&URL=http%3a%2f%2fresearch.ntu.edu.sg%2ffacts>
>  SBS http://www.sbs.ntu.edu.sg
> <https://webmail.ntu.edu.sg/owa/redir.aspx?C=NowMSA1uEU28_-tbNZ04OFa6tI6xfNUIBfsPqR4p_Q-eM0bDbGMdyiaZIscRauGtU1W3TiKFiEk.&URL=http%3a%2f%2fwww.sbs.ntu.edu.sg%2fPages%2fHome.aspx>
>
>
> ------------------------------
> *From:* 3dem <3dem-bounces at ncmir.ucsd.edu> on behalf of
> 3dem-request at ncmir.ucsd.edu <3dem-request at ncmir.ucsd.edu>
> *Sent:* 23 August 2019 12:34 AM
> *To:* 3dem at ncmir.ucsd.edu <3dem at ncmir.ucsd.edu>
> *Subject:* 3dem Digest, Vol 144, Issue 31
>
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> Today's Topics:
>
>    1. EMBO Practical Course CEM3DIP 2020: Single particle cryoEM of
>       macromolecular-assemblies and cellular tomography (Natesh Ramanathan)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Thu, 22 Aug 2019 22:04:39 +0530
> From: Natesh Ramanathan <natesh at iisertvm.ac.in>
> To: 3dem at ncmir.ucsd.edu
> Subject: [3dem] EMBO Practical Course CEM3DIP 2020: Single particle
>         cryoEM of macromolecular-assemblies and cellular tomography
> Message-ID:
>         <
> CAFT3tKsM4XvxHGtyVV5rzLkGjpKeo6zVfhe19vQe8eicLeUWaA at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> *Second Announcement:  (Deadline for registration is fast approaching;
> Travel grants and Child care grants available)*
>
>
>
> *EMBO Practical course Cryo Electron Microscopy and 3 Dimensional Image
> Processing (CEM3DIP 2020): **Single particle cryoEM of
> macromolecular-assemblies and cellular tomography*
>
>
>
> *19-30 January, 2020, at IISER Kolkata, Kolkata, India.*
>
>
>
>             The *EMBO Practical Course *Cryo Electron Microscopy and 3
> Dimensional Image Processing (*CEM3DIP 2020): **Single particle cryoEM of
> macromolecular-assemblies and cellular tomography* will be held at
> IISER-Kolkata <https://www.iiserkol.ac.in/web/en/> in Kolkata
> <https://en.wikipedia.org/wiki/Kolkata>, India and IICB-Kolkata
> <https://www.iicb.res.in/> (on specimen preparation and data collection
> hands-on sessions days).  This is an extensive 10 day practical course that
> will be held  from 19  January ? 30 January 2020 at IISER-Kolkata (with a 1
> day break, to chill out on a group excursion to historic and modern places
> of Kolkata and dinner-cum river cruise on the Ganges
> <https://en.wikipedia.org/wiki/Hooghly_River>).
>
>
>
>
>
>             For Course details and to apply online go to the URL :
>
>
> http://meetings.embo.org/event/20-cem3dip
>
>
>
> Important dates :
>
> *Registration Deadline                         : 15 September 2019*
>
>
>
>            The course will focus on structural biology using Transmission
> Electron Microscopy and aims to teach the participants the basic principles
> and practical aspects of specimen preparation, data collection, Image
> processing and 3D reconstruction in Single Particle Cryo Electron
> Microscopy(SPCryoEM) and Cellular Tomography.  This is a hands-on course,
> in which theory and practicals are tightly intertwined.  There will be
> practical session to teach sample preparation for Single particle ?ve stain
> and cryoEM and data collection.  Subset of participants will be encouraged
> to bring their samples.  The topics covered will suit both the new entrants
> to the field as well as those who wants to acquire an in-depth
> understanding  of  the fundamental principles and practical aspects.
> Applications are invited from PhD students, Post Docs and Researchers
> (Faculties/PI?s and protein crystallographers) who wish to acquire
> knowledge in SPCryoEM and Cellular Tomography.  Applicants from all over
> the world are encouraged to apply.  For more information please contact the
> course coordinator at *cem3dip2020 at iisertvm.ac.in
> <cem3dip2020 at iisertvm.ac.in>*.
>
>
>
>             *The basic format of the course* will be theoretical lectures
> in the mornings followed by hands on practical session on specimen
> preparation, data collection and image processing on computer workstations
> in the afternoon.  Evenings will be reserved for poster presentations by
> the participants and research talks by the participants/instructors.
>
>
>
> *The instructors/speakers for the course will include:*
>
> Joachim Frank (Columbia University), Grant Jensen (Caltech), Garib N
> Murshudov (MRC-LMB), Jos? Mar?a Carazo (CNB-CSIC), Elena Orlova (Birkbeck
> College), Elizabeth Wright (University of Wisconsin), Kelly Lee (University
> of Washington), Rajendra K Agrawal (Wadsworth Centre), Giulia Zanetti
> (Birkbeck College), Montserrat Sams? (VCU), Ana Casa?al (MRC-LMB), Arjen
> Jakobi (Kavli Institute), Brent L. Nannenga (Arizona State University),
> Carlos Oscar S Sorzano (CNB-CSIC), Dmitry Lyumkis (Salk Instiute), Osman
> Salih (EMBL-EBI), Florence Tama (Nagoya University), Jayati Sengupta
> (CSIR-IICB), Manidipa Banerjee (IIT Delhi), Moumita Dutta (ICMR-NICED),
> Partha Pratim Datta (IISER Kolkota), Ramanathan Natesh (IISER
> Thiruvananthapuram), Smarajit Polley (Bose Institute), Somnath Dutta
> (IISc).
>
>
>
> For more details and to apply for this course kindly visit the course
> website *http://meetings.embo.org/event/20-cem3dip
> <http://meetings.embo.org/event/20-cem3dip>**. *
>
>
>
> The selection will be based on applicants CV, current research project,
> relevant skills, future plans and most importantly the quality of the
> submitted poster abstract.  Applicants should include in the section
> ?Details
> of Current research Project and Statement of Purpose? an explanation of why
> attendance at the course would further the applicant's own research.
> Having
> some preliminary data or exposure to electron microscopy /cryoEM/
> tomography will be preferred.  PhD and Postdoctoral applicants should
> request their supervisor to send a recommendation letter, before the
> application deadline, by e-mail directly to the organizer at
> cem3dip2020 at iisertvm.ac.in.  Only selected people from the applicants will
> be contacted.  Based on the availability of funds, travel and/or
> registration, accommodation bursaries for a subset of selected applicants
> can be provided.  If you want to request for registration and/or
> accommodation bursaries, mention that explicitly in the space for
> ?Justification
> for Travel Grant? and justify your request.  Child care grants are
> available to enable scientists with families to attend this event. Eligible
> costs include fees for a caregiver or child-care facility, travel costs for
> a caregiver, or travel costs for taking the child to the meeting etc.  If
> you want to request for a child care grant to help you attend this EMBO
> practical course, mention "Yes" in your application under this heading.
> All
> registered participants have to present posters on their research work.  A
> selection of participants will be invited to give an oral presentation of
> their ongoing research work.
>
>
>
> We shall truly appreciate if this e-mail print out can be displayed at your
> Institute notice board and circulated among your friends, scholars and
> students encouraging them to apply for this course.
>
>
>
> Sincerely yours,
>
> Ramanathan Natesh, Partha Pratim Datta, Jayati Sengupta, Smarajit Polley
> and Moumita Dutta,
>
> Course Coordinators EMBO practical course CEM3DIP 2020.
>
> Phone: *+91-471-2778087*
>
> Please write to *cem3dip2020 at iisertvm.ac.in <cem3dip2020 at iisertvm.ac.in>*
> for
> any queries/sponsorship regarding this course.
>
> --
> ----------------------------------------------------------
> "Live Simply and do Serious Things .. "
> - Dorothy Mary Crowfoot Hodgkin OM, FRS
>
> "In Science truth always wins"
> - Max Ferdinand Perutz OM FRS
> ----------------------------------------------------------
> Dr. Ramanathan Natesh
> Assistant Professor,
> School of Biology,
> Indian Institute of Science Education and Research Thiruvananthapuram
> (IISER-TVM),
> Maruthamala P.O., Vithura,
> Thiruvananthapuram,  695551, Kerala, India
>
> natesh at iisertvm.ac.in
> http://www.researcherid.com/rid/C-4488-2008
> ORCID: http://orcid.org/0000-0002-1145-5962
> https://publons.com/author/1520837/ramanathan-natesh#profile
> http://faculty.iisertvm.ac.in/natesh
>
> Office Ph. 0091- 471-2778087
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>
>
> --
> ----------------------------------------------------------
> "Live Simply and do Serious Things .. "
> - Dorothy Mary Crowfoot Hodgkin OM, FRS
>
> "In Science truth always wins"
> - Max Ferdinand Perutz OM FRS
> ----------------------------------------------------------
> Dr. Ramanathan Natesh
> Assistant Professor,
> School of Biology,
> Indian Institute of Science Education and Research Thiruvananthapuram
> (IISER-TVM),
> Maruthamala P.O., Vithura,
> Thiruvananthapuram,  695551, Kerala, India
>
> natesh at iisertvm.ac.in
> http://www.researcherid.com/rid/C-4488-2008
> ORCID: http://orcid.org/0000-0002-1145-5962
> https://publons.com/author/1520837/ramanathan-natesh#profile
> http://faculty.iisertvm.ac.in/natesh
>
> Office Ph. 0091- 471-2778087
> _______________________________________________
> 3dem mailing list
> 3dem at ncmir.ucsd.edu
> https://mail.ncmir.ucsd.edu/mailman/listinfo/3dem
>
>
>
> --
> ----------------------------------------------------------
> "Live Simply and do Serious Things .. "
> - Dorothy Mary Crowfoot Hodgkin OM, FRS
>
> "In Science truth always wins"
> - Max Ferdinand Perutz OM FRS
> ----------------------------------------------------------
> Dr. Ramanathan Natesh
> Assistant Professor,
> School of Biology,
> Indian Institute of Science Education and Research Thiruvananthapuram
> (IISER-TVM),
> Maruthamala P.O., Vithura,
> Thiruvananthapuram,  695551, Kerala, India
>
> natesh at iisertvm.ac.in
> http://www.researcherid.com/rid/C-4488-2008
> ORCID: http://orcid.org/0000-0002-1145-5962
> https://publons.com/author/1520837/ramanathan-natesh#profile
> http://faculty.iisertvm.ac.in/natesh
>
> Office Ph. 0091- 471-2778087
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>
> --
> ----------------------------------------------------------
> "Live Simply and do Serious Things .. "
> - Dorothy Mary Crowfoot Hodgkin OM, FRS
>
> "In Science truth always wins"
> - Max Ferdinand Perutz OM FRS
> ----------------------------------------------------------
> Dr. Ramanathan Natesh
> Assistant Professor,
> School of Biology,
> Indian Institute of Science Education and Research Thiruvananthapuram
> (IISER-TVM),
> Maruthamala P.O., Vithura,
> Thiruvananthapuram,  695551, Kerala, India
>
> natesh at iisertvm.ac.in
> http://www.researcherid.com/rid/C-4488-2008
> ORCID: http://orcid.org/0000-0002-1145-5962
> https://publons.com/author/1520837/ramanathan-natesh#profile
> http://faculty.iisertvm.ac.in/natesh
>
> Office Ph. 0091- 471-2778087
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