[3DEM]asymmetric unit segmentation

C.J. biocjh at gmail.com
Thu Jul 14 05:40:51 PDT 2011


thank you for useful information

regars!
C.J.

2011/7/13 Steven Ludtke <sludtke at bcm.edu>:
> While Bajaj's group at UT Austin has some methods they claim to work fully automatically, segmentation almost always
> requires some human effort (and additional knowledge) to perform correctly.  I would suggest the 'Segger' tool developed
> by Grig Pintilie, now built into Chimera, which is only semi-automatic, but easy to use. Chimera has a
> variety of other useful tools for dealing with symmetry as well, which are at least somewhat documented in the short
> videos Tom Goddard put together : http://www.cgl.ucsf.edu/chimera/videodoc/videodoc.html
>
> ----------------------------------------------------------------------------
> Steven Ludtke, Ph.D.
> Associate Professor
> Co-Director National Center For Macromolecular Imaging
> Dept of Biochemistry and Mol. Biol.
> Baylor College of Medicine
> sludtke at bcm.edu
> stevel at alumni.caltech.edu
>
>
>
>
> On Jul 13, 2011, at 7:39 AM, C.J. wrote:
>
>> Dear all,
>>
>> Any one have a experience on segmentation of asymmetric unit from
>> icosahedron virus structure volume?
>> I wonder whether there is any programme could process that automatically?
>> Any comment would be appreciated!
>>
>> --
>> Regards!
>> C.J.
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>> 3dem at ncmir.ucsd.edu
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>
>



-- 
Regards!
C.J.


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