[3dem] Compiling AreTomo3

[Sylvain Trepout]

Hi Reza,

Several solutions here:
https://urldefense.com/v3/__https://github.com/czimaginginstitute/MotionCor3/issues/11__;!!Mih3wA!HtwJgXNsm5tdmlc1YXh-tutDsGEZUuy4Q7fL67nsFE5ihUQx9Bhx-qPKR7vTyrFDOfiRnPRxhLRWPtLrFX7GvI_kKB_kGfE3$ 

Best,
Sylvain

PhD
Research Fellow - Microscopy Australia

*Monash University*
Ramaciotti Centre for Cryo-EM
G92, 15 Innovation Walk, Clayton Campus
Victoria, 3800 Australia

E: sylvain.trepout at monash.edu


On Fri, 26 Jul 2024 at 03:12, Reza Khayat <rkhayat at ccny.cuny.edu> wrote:

> Hi,
>
> We are getting the following error when compiling AreTomo3. The error
> occurs for a number of  files being compiled.  Any help would be
> appreciated:
>
> /usr/bin/ld:
> /home/rkhayat/Applications/AreTomo3/LibSrc/Lib/libmrcfile.a(CSaveMainHeader.o):
> relocation R_X86_64_32 against symbol __gxx_personality_v0@@CXXABI_1.3'
> can not be used when making a PIE object; recompile with -fPIE /usr/bin/ld:
> /home/rkhayat/Applications/AreTomo3/LibSrc/Lib/libmrcfile.a(CLoadImage.o):
> relocation R_X86_64_32 against symbol __gxx_personality_v0@@CXXABI_1.3'
> can not be used when making a PIE object; recompile with -fPIE
>
> Bes
> Reza Khayat, PhD
> City College of New York
> Associate Professor
> Department of Chemistry and Biochemistry
> Co-Director NIH G-RISE program
>
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>
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