[3dem] Help in importing tomograms generated by AreTomo3 into RELION-5.0-beta-3

Justus Francis justusfrancis5 at gmail.com
Tue Aug 6 02:01:47 PDT 2024


Dear Ricardo,
Thank you for the response.
Is there a workaround for this to work in RELION -5.0 or do you suggest I
do this in RELION 4 ?

Thanks and regards
Justus

On Tue, 6 Aug 2024 at 14:02, Ricardo Righetto <ricardorighetto at gmail.com>
wrote:

> Dear Justus,
>
> RELION-5 does not support importing of tilt series via the "Tomo import"
> tab as in RELION-4. The STAR file conventions are different.
>
> Best wishes,
>
> --
> Ricardo Diogo Righetto
>
>
> Em seg., 5 de ago. de 2024 às 16:30, Justus Francis <
> justusfrancis5 at gmail.com> escreveu:
>
>> Dear community,
>> I am trying to import a star file (tomograms_descr.star)
>> into RELION-5.0-beta-3 workflow.
>> This star file contains the tilt series that have been processed using
>> AreTomo3.
>> In order to do this i am trying to follow the instructions provided in
>>  https://urldefense.com/v3/__https://relion.readthedocs.io/en/release-4.0/STA_tutorial/ImportTomo.html__;!!Mih3wA!HVucFO4XScqFRO3EiyABP_KbfLjn1gzoh8uuMaOj0BQDvE0GX4ofi-2ompFT01CaZJl8smVx2szODS5mrZ9wQnka8qA$ 
>> <https://urldefense.com/v3/__https://relion.readthedocs.io/en/release-4.0/STA_tutorial/ImportTomo.html__;!!Mih3wA!FAzIlZGF1aJ9u9xQnIbqZaFTaqLgEhZiCTGFU2rNdsQhWDMPk6L5C0aLbwnt9S9eu2pq6NTX3s8JlKyuJQB2pyQxqtM$>
>> However I am not able to find the "Tomo import"  tab in the RELION 5
>> interface.
>> I have also attached the star file that I am trying to import.
>> I will appreciate it if you can kindly help me with this step.
>>
>> Thanks and regards
>> Justus
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>> 3dem at ncmir.ucsd.edu
>> https://mail.ncmir.ucsd.edu/mailman/listinfo/3dem
>>
>
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