[3dem] Output Imod folders from Relion 5 Tomo

[Sjors Scheres]

Dear Ioannis,

Have you tried providing this option to AreTomo2 on the relion GUI using 
the "Other AreTomo2 arguments"?

Best wishes,

Sjors


On 25/02/2025 09:49, Ioannis Skalidis via 3dem wrote:
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> Dear 3DEM,
>
> I was wondering if anyone has an idea on how I would be able to 
> generate the Imod folder necessary to move to other software for 
> tomogram reconstruction, after I do tilt series alignment with AreTomo 
> in Relion 5. The standalone version of AreTomo has the -OutImod 
> command, but this cannot be included as an additional argument when 
> running it from within Relion 5.
> Does anyone have a suggestion?
>
> Thanks in advance,
> Ioannis.
>
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