[3dem] MotionCor3 and AreTomo2 are open source now

[Shawn Zheng]

Hi Takanori,

The sources of these lib files will be released as soon as we find out the
right way to do so. They are libraries shared by both MotionCor3 and
AreTomo2. I prefer repos are only for functional repos, not to crowd our
github with repos for the supporting libraries. I will let you know once
they are uploaded. Thanks for pointing out this.

Best,
Shawn



On Sun, Oct 29, 2023 at 3:41 PM Takanori Nakane <
tnakane.protein at osaka-u.ac.jp> wrote:

> Hi,
>
> This is really wonderful!
>
> I have been curious about algorithmic details of MotionCor2,
> e.g. about defect correction and rejection of unreliable patches,
> and finally I can study it. Thank you very much.
>
> I wish other closed source projects also reconsider their
> strategies.
>
> Regarding your repository, I see three binary blobs:
> Lib/{libcuutil.a,libmrcfile.a,libutil.a}.
> Their source codes (except header files) seem missing.
> Is this intentional?
>
> Best regards,
>
> Takanori Nakane
>
> On 10/30/23 01:05, Shawn Zheng wrote:
> > Dear Colleagues,
> >
> > I am pleased to announce that the source code of MotionCor3 and AreTomo2
> > has been made public and can be downloaded via
> > https://urldefense.com/v3/__https://github.com/czimaginginstitute__;!!Mih3wA!Gd-dEfu1UCqEocNhdju9mJMTZoOqX55cP1AGaqCAD7JlvLefUoeQE7GmYSD3giQfQqOLkuTyulUotzgD$ 
> > <
> https://urldefense.com/v3/__https://github.com/czimaginginstitute__;!!Mih3wA!AW0HEArayBvlsHDpuyqCmMr14MjjriJm4DQIn_-2bBC-Z-IiA4bN4leRNYhf08docMuFnhY__F5GI-p3$>.
> Your enthusiasm, inspiration, feedback on improvements, and bug reports are
> indispensable throughout the entire development history. We hope the source
> code can help you a bit now and inspire new ideas and interests. As always,
> your input is highly regarded and welcome. Please share your thoughts and
> let's work together to improve these software packages to better serve the
> community.
> >
> > With my best regards,
> > Shawn
> >
> > _______________________________________________
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> > 3dem at ncmir.ucsd.edu
> > https://mail.ncmir.ucsd.edu/mailman/listinfo/3dem
>
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