[3dem] SHape REtrieval Contest (SHREC) 2020 track "Classification in Cryo-Electron Tomograms"

[Ludtke, Steven J.]

Hi Fredrich,
were the results from the last one ever made publicly available? Is the data and/or results of the last one available online somewhere?  I looked briefly, and could find websites mentioning it, but little else?   Not much motivation to participate if the results are all closed (other than resulting publications, of course).

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Steven Ludtke, Ph.D. <sludtke at bcm.edu<mailto:sludtke at bcm.edu>>                      Baylor College of Medicine
Charles C. Bell Jr., Professor of Structural Biology
Dept. of Biochemistry and Molecular Biology                      (www.bcm.edu/biochem<http://www.bcm.edu/biochem>)
Academic Director, CryoEM Core                                        (cryoem.bcm.edu<http://cryoem.bcm.edu>)
Co-Director CIBR Center                                    (www.bcm.edu/research/cibr<http://www.bcm.edu/research/cibr>)



On Mar 5, 2020, at 2:32 PM, Friedrich Förster <f.g.forster at uu.nl<mailto:f.g.forster at uu.nl>> wrote:

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________________________________
Dear 3D-EM,

We would like to announce SHape REtrieval Contest (SHREC) 2020 track "Classification in Cryo-Electron Tomograms". In this track, we propose a task of localization and classification of biological particles in the cryo-electron tomograms. We provide a dataset of simulated tomograms with annotations and additional ground truth information. We hope this will enable researchers to try out different methods, including machine learning approaches.

Track participants will have 4 weeks to send us their results (text file with a list of found and classified particles, and one-page description of their method). Track results are evaluated, analyzed and combined into a joint paper, that will be submitted to and presented at 3D Object Retrieval Workshop, 4-5 September 2020: https://workshop.cgv.tugraz.at/3dor2020/<https://urldefense.proofpoint.com/v2/url?u=https-3A__workshop.cgv.tugraz.at_3dor2020_&d=DwMFaQ&c=ZQs-KZ8oxEw0p81sqgiaRA&r=Dk5VoQQ-wINYVssLMZihyC5Dj_sWYKxCyKz9E4Lp3gc&m=WQWsg1ffsdRMpCT3N2KurlValKUv0BSA79S5TEtJwJI&s=ZRhUa-_ujY1hScNGihjC3eox3CQMLTVVLJNwpVIO8No&e=>
The general objective of the SHREC is to evaluate the effectiveness and compare localization and classification methods.

If you are interested, please check out the website for more information: http://www.shrec.net/cryo-et/<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.shrec.net_cryo-2Det_&d=DwMFaQ&c=ZQs-KZ8oxEw0p81sqgiaRA&r=Dk5VoQQ-wINYVssLMZihyC5Dj_sWYKxCyKz9E4Lp3gc&m=WQWsg1ffsdRMpCT3N2KurlValKUv0BSA79S5TEtJwJI&s=Na6EdCP08UsaaLiGVvgtlDpGfo_I_7UqfTLhyFVjTpY&e=>

Best regards

Ilja Gubins, Gijs van der Schot, Marten Chaillet, Remco Veltkamp, Friedrich Förster

--
prof. dr. Friedrich Foerster

Bijvoet Center for Biomolecular Research
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands

Tel: +31 30 253 4318

http://www.uu.nl/en/research/cryo-em<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.uu.nl_en_research_cryo-2Dem&d=DwMFaQ&c=ZQs-KZ8oxEw0p81sqgiaRA&r=Dk5VoQQ-wINYVssLMZihyC5Dj_sWYKxCyKz9E4Lp3gc&m=WQWsg1ffsdRMpCT3N2KurlValKUv0BSA79S5TEtJwJI&s=AzonDRX9DtQIG5Ieb7z1Fm4BfNFNs1S76l_r2Sd6sKM&e=>
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