[3dem] Visualizing selected particles on micrographs in Relion

[Roli Singh]

Thanks so much  Shintaro !

On Sat, Jun 9, 2018 at 8:58 PM, Shintaro Aibara <shintaro.aibara at gmail.com>
wrote:

> Hi Roli,
>
> If you run an extraction job using the "re-extract rerefined particles"
> then you will get a coords_extract.star that will allow you to visualize
> your remaining particle coordinates. You can extract the particles as a 4x4
> boxsize if you want it to be fast.
>
> Best wishes
> Shintaro
>
> On Sun, Jun 10, 2018 at 12:05 AM, Roli Singh <sroli1410 at gmail.com> wrote:
>
>> Dear all,
>>
>> Is there a way to visualize selected particles from 2D classification and
>> subset selection on micrographs in Relion, the way we see after
>> autopicking? With iterative 2D classifications I have selected a pool of
>> particles and now I want to visualize those particles on micrographs to see
>> if they need to be cleaned further manually?
>>
>> Thanks a lot in advance !
>>
>> Best,
>> Roli
>>
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>>
>>
>
>
> --
> Yours Sincerely,
> Shintaro Aibara
>
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