[3dem] New Volume Segmentation Software: SuRVoS Workbench

michele.darrow at diamond.ac.uk michele.darrow at diamond.ac.uk
Tue Dec 6 05:41:22 PST 2016


I am writing to introduce a new 3D volume segmentation software:

SuRVoS (Super-Region Volume Segmentation) Workbench is a new software for semi-automated segmentation of 3D image volumes. It has been developed jointly between the University of Nottingham, UK and Diamond Light Source, UK and is open source: https://diamondlightsource.github.io/SuRVoS/

SuRVoS can be used on volume data from a variety of techniques, e.g. electron tomography, SEM, cryo soft X-ray tomography, and with no restrictions on sample type. It provides high-level filtering and machine learning algorithms for feature detection and model training. It also provides super-region building for smarter, quicker segmentation and a set of tools for data analysis.

Feel free to get in touch through the github account or via email with any questions, feature requests or bug reports.

Best,
Michele Darrow (michele.darrow at diamond.ac.uk<mailto:michele.darrow at diamond.ac.uk>)
Imanol Luengo (imanol.luengo at nottingham.ac.uk<mailto:imanol.luengo at nottingham.ac.uk>)
Mark Basham (mark.basham at diamond.ac.uk<mailto:mark.basham at diamond.ac.uk>)

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