[3dem] how to run EMAN2 via command line

[Steven Ludtke]

Hi Hui. Let me start by pointing out that there is an EMAN2 Google Group (mailing list), which is 
probably more appropriate:

https://groups.google.com/forum/?hl=en#!forum/eman2

also, the EMAN2 documentation Wiki can answer many questions:

http://blake.bcm.edu/emanwiki/EMAN2

Assuming you followed the installation instructions, you should be able to open a terminal window and 
run EMAN2 commands directly, such as:

e2version.py
e2speedtest.py

If simple commands like these don't work, we'll need to know what type of machine and OS version you're using
before we can help more. If those commands do work, then you're having some other problem, and we'll need
to see the specific error to figure it out. 

Regardless, I'd suggest moving the discussion to the Google Group or you can just email me directly.

cheers

----------------------------------------------------------------------------
Steven Ludtke, Ph.D.
Associate Professor
Co-Director National Center For Macromolecular Imaging        (ncmi.bcm.edu)
Co-Director CIBR Center                          (www.bcm.edu/research/cibr)
Dept of Biochemistry and Mol. Biol.                    (www.bcm.edu/biochem)
Baylor College of Medicine                              
sludtke at bcm.edu
stevel at alumni.caltech.edu



On Feb 2, 2012, at 8:05 AM, Hui Shi wrote:

> Hi All,
> 
> I'm so sorry for bothering you. I'm just wondering how I can run eman2
> via command line in terminal. I tried to copied the commands that
> appeared in terminal after the parameter setting via GUI and run that
> command in separate terminal, but it seemed that it didn't work. Can
> someone help me out with this issue?
> 
> Thanks a lot!
> 
> Hui Shi
> _______________________________________________
> 3dem mailing list
> 3dem at ncmir.ucsd.edu
> https://mail.ncmir.ucsd.edu/mailman/listinfo/3dem