[3dem] ImageJ plugins for reading EM images

[Carlos Oscar Sorzano]

Dear Yadong,

in Xmipp 3 we are using ImageJ for visualization and we have solved the 
reading for most formats used in EM. Xmipp 3 has not yet been released 
but this part can be safely used. You would need a couple of jar files 
to copy into the plugins directory and a dynamic library from Xmipp. The 
dynamic library has to be compiled from its source files, if you tell us 
the architecture (x86, ...) and it is a standard Linux distribution we 
can supply the already compiled library. If not, you could compile it 
from the development Xmipp version.

Kind regards, Carlos Oscar

El 16/09/11 21:57, Yadong Yu escribió:
> Hi,
>
> I found ImageJ very handy to view micrographs. Its filter tools like 
> band-pass-filter and median-filter are really useful.
> Other than the default DM3 reader, ImageJ can not read digital 
> micrographs. However I was prompted the "Open_MRC_Leginon" plugin when 
> I tried to open an MRC file.
> Anyone has this plugin file, or plugins for reading other formats?
>
> Sorry for this kinda irrelevant message.
>
> -ed
>
>
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-- 
------------------------------------------------------------------------
Carlos Oscar Sánchez Sorzano                  e-mail:   coss at cnb.csic.es
Biocomputing unit                             http://biocomp.cnb.csic.es
National Center of Biotechnology (CSIC)
c/Darwin, 3
Campus Universidad Autónoma (Cantoblanco)     Tlf: 34-91-585 4510
28049 MADRID (SPAIN)                          Fax: 34-91-585 4506
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