[3dem] VolRover volume segmentation

David Gene Morgan dagmorga at indiana.edu
Wed Jul 15 08:59:07 PDT 2009


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Hi,

	I just downloaded the VolumeRover.zip file.  My system is missing a
library:  libboost_system-gcc41-mt-1_35.so.1.35.0.  I'll see if I can
resolve this myself and get back in touch.

brrk at mail.utexas.edu wrote:
> Hi everyone,
> 
> The version up for download on our website is, unfortunately, dated.  A
> 64-bit binary of the latest version is available at
> http://www.ices.utexas.edu/~brrk/VolumeRover.zip , and fixes several
> bugs, including the ones that David discusses below. The source code is
> also available on request.
> 
> Please don't hesitate to contact us if you have any further questions
> about VolRover.
> 
> thanks,
> 
> Radhakrishna Bettadapura
> 
> 
> -------- Original Message --------
> Subject:    [3dem] VolRover volume segmentation
> Date:    Mon, 13 Jul 2009 16:57:27 -0400
> From:    David Gene Morgan <dagmorga at indiana.edu>
> To:    3dem at ncmir.ucsd.edu
> 
> 
> Hi,
> 
>     Has anyone recently used VolRover to segment a virus particle?  I'm
> probably being an idiot, but I have tried several times over the past
> 6-8 months, and it doesn't seem to work.  I have tried with my own data,
> and when that failed, I tried to follow the tutorial using the test data
> supplied with VolRover.  That also fails miserably (the program crashes
> without leaving anything I find useful).  I've tried to contact the
> developers but haven't got much help from those attempts.
> 
>     If other people are having more luck, I'd love to learn what they are
> doing that I'm not.  Thanks.
> 
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- --
                 David Gene Morgan
                  cryoEM Facility
                  005B Simon Hall
           Indiana University Bloomington
               812 856 1457 (office)
               812 856 3221 (EM lab)
            http://bio.indiana.edu/~cryo
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