[3dem] using nad_eed

[Vladan Lucic]

Dear Lea,

I usually denoise my tomograms with Tomoand which uses an improved version of 
nonlinear anisotropic diffusion in 3d and is well documented. It's written by 
Jose Fernandez and Sam Li and available at  
http://www.ual.es/~jjfdez/SW/tomoand.html.

Vladan

On Thursday 06 November 2008 10:36:31 Léa wrote:
> Dear all,
>
> I'd like to use the nad_eed _3d program to denoise some tomograms. I
> made a small stack to test the different parameters but I get the
> following error message:
>
> bcsmac68:~/Desktop lea$ nad_eed_3d -i 3,6,9,12,15,18,21 -k 1.2
> tomo.rec tomo.nad
>
> Program nad_eed_3d
>          started at: Tue Nov  4 15:27:30 2008
> input file:          tomo.rec
> output file:         tomo.nad
> ERROR: nad_eed_3d - reading header of input file tomo.rec
>
> Any idea how to solve this?
>
> Otherwise I also tried to do this using the parallel processing but I
> didn't manage to have it proccessing...
>
> Many thanks for your help!
>
>
> Lea Siksou
>
> PhD student
> INSERM U789 - Biologie Cellulaire de la Synapse Normale et Pathologique
> Ecole Normale Superieure
> 46 rue d'Ulm
> 75005 Paris
> France
>
> tel: 00331 4432 3533