[3DEM] FSC Fourier Shell Correlation program available NOW!
Marin van Heel
m.vanheel at imperial.ac.uk
Wed Jun 21 10:19:27 PDT 2006
The Fourier Shell Correlation (FSC) is the standard resolution
curve for three-dimensional reconstructions of single particles.
A free download of the FSC program is now available from:
http://www.imagescience.de/fsc <http://www.imagescience.de/fsc>.
This distribution is supported by a grant of the European Union: FP6 /
NOE http://www.3dem-noe.org/. <http://www.3dem-noe.org/>
This version of the IMAGIC FSC program is presented with a Java
Graphical User Interface (GUI).
Conversions from 3D data formats other than IMAGIC are possible through
the "import" option
which uses the EM2EM universal EM converter.
It was shown in a recent paper (van Heel M., Schatz M:* *Fourier Shell
Correlation Threshold Criteria,* */
J. Struc. Biol./* *151 (2005) 250-262.), that all fixed value threshold
criteria like *
"0.5" *or* "0.143"*, are *incorrect*!
The better resolution threshold curve is the *½-bit curve* which is now
generated by the
FSC programs. The program also plots the classical 3-sigma criterion
indicating at
which resolution one has collected data significantly above the
background noise level.
Moreover, the program takes into account all factors that influence the
FSC curve
including: pointgroup symmetry of the structure and its size within the
reconstruction volume.
Have fun!
Marin van Heel
================================================================
Marin van Heel
Professor of Structural Biology
Division of Molecular Biosciences
Faculty of Natural Sciences
Imperial College London
Biochemistry Building
South Kensington Campus
London SW7 2AZ, UK
Tel: + 44 (0)20 7594 5316
Fax: + 44 (0)20 7594 5317
Priv.tel. + 44 (0)20 8286 4248
e_mail: m.vanheel at ic.ac.uk
and: Osnat Lipson <vanheel.office at ic.ac.uk>
web: www.cbem.ic.ac.uk
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