[3dem] 3dem Digest, Vol 217, Issue 3

Sun Sep 7 17:54:55 PDT 2025

Amit Kumar, Ph.D
Post-doctoral Fellow
University of California, San Diego
mail: amk001 at ucsd.edu
https://urldefense.com/v3/__https://scholar.google.com/citations?user=FvyLqMAAAAAJ&hl=en__;!!Mih3wA!EN3OWSL4RxRU7T5z40CfWH8SqOHfuuv0HBJAuFkkramsp_or9vqcjZAy-QJ9N7eN-Cxei1UTUCy7R2fKCr3jWDaI$ 

On Wed, Sep 3, 2025 at 9:36 PM <3dem-request at ncmir.ucsd.edu> wrote:

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> Today's Topics:
>
>    1. Application Now Open: 2025 CryoEM Modeling & Structure
>       Validation Workshop (Oct 28?30) (Dunn, Lisa B.)
>    2. Joint Postdoctoral Opportunity in Cryo-EM/Cryo-ET and
>       Condensate Biology (Donghyun Park)
>    3. Cryo-EM Specialist Position at Novartis (Basel) (Mazdak Radjainia)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Tue, 2 Sep 2025 19:32:15 +0000
> From: "Dunn, Lisa B." <lisa at slac.stanford.edu>
> To: "3dem at ncmir.ucsd.edu" <3dem at ncmir.ucsd.edu>
> Subject: [3dem] Application Now Open: 2025 CryoEM Modeling & Structure
>         Validation Workshop (Oct 28?30)
> Message-ID:
>         <
> DM6PR07MB58350A6FAED62EE9178307D69306A at DM6PR07MB5835.namprd07.prod.outlook.com
> >
>
> Content-Type: text/plain; charset="utf-8"
>
> Dear CryoEM Community,
> We are excited to announce the 2025 CryoEM Modeling and Structure
> Validation Workshop, hosted by the Stanford-SLAC CryoEM Center (S2C2) from
> October 28?30, 2025. This hybrid workshop (in-person at SLAC and virtual
> via Zoom) is free to attend.
> This workshop will bring together leading experts to share the latest best
> practices, tools, and techniques in cryoEM model building, refinement,
> visualization, validation, and deposition.
> Confirmed speakers include:
>
>   *   Paul Emsley & Lucrezia Catapano (MRC)
>
>   *   Dari Kimanius (Chan Zuckerberg Institute for Advanced Biological
> Imaging)
>
>   *   Rachael Kretsch (Stanford University)
>
>   *   Stephanie Wankowicz (Vanderbilt University)
>
>   *   Tom Goddard (UCSF)
>
>   *   Tristan Kroll (Altos Labs)
>
>   *   Nigel Moriarty & Oleg Sobolev (LBNL)
>
>   *   Jane Richardson (Duke University)
>
>   *   Greg Pintilie (Stanford University)
>
>   *   Stephen Burley & Justin Flatt (RCSB Protein Data Bank)
> The program will feature expert-led talks and live demonstrations on Coot,
> Phenix, ModelAngelo, ISOLDE, ChimeraX, and other software tools, along with
> discussions on structure validation and deposition guidance. All sessions
> will be recorded and made available on the S2C2 website after the event for
> participants to review or catch up on missed content.
> ________________________________
> How to Apply
> We welcome applications from researchers, postdocs, and students.
>
>   *   Apply here: Workshop Application<
> https://urldefense.com/v3/__https://s2c2.slac.stanford.edu/form/stanford-slac-cryoem-center-mode__;!!Mih3wA!GmMChngdj8RsEB7d8-gFEwxFK-4CppLZnZmJ3PY59HPuPIuarYU7I5W2V66HHko5UsO671bK2mmbVvej0hinQxY$
> >
>
>   *   Application deadline: September 21, 2025
>   *   Early acceptance notifications (for in-person participation) will be
> sent by September 26, 2025.
> In-person attendance is limited, so we encourage you to apply early.
> ________________________________
> For more information, visit:
> https://urldefense.com/v3/__https://s2c2.slac.stanford.edu/training/current-workshop__;!!Mih3wA!GmMChngdj8RsEB7d8-gFEwxFK-4CppLZnZmJ3PY59HPuPIuarYU7I5W2V66HHko5UsO671bK2mmbVvej2rx7K9g$
> Scientific inquiries: Dr. Amy Liu (yanliu10 at slac.stanford.edu<mailto:
> yanliu10 at slac.stanford.edu>)
> Registration/lodging questions: Mrs. JoAnn Polizzi (
> joannp at slac.stanford.edu<mailto:joannp at slac.stanford.edu>)
> We look forward to welcoming you to this exciting and informative event!
> ? The S2C2 Team
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> ------------------------------
>
> Message: 2
> Date: Tue, 2 Sep 2025 22:49:24 +0000
> From: Donghyun Park <dopark at scripps.edu>
> To: "3dem at ncmir.ucsd.edu" <3dem at ncmir.ucsd.edu>
> Subject: [3dem] Joint Postdoctoral Opportunity in Cryo-EM/Cryo-ET and
>         Condensate Biology
> Message-ID:
>         <
> MN2PR11MB3680F322C3BD77DD84382AB0DB06A at MN2PR11MB3680.namprd11.prod.outlook.com
> >
>
> Content-Type: text/plain; charset="windows-1252"
>
> Dear cryo-EM community,
>
> My lab (Park Lab<
> https://urldefense.com/v3/__https://www.the-park-lab.org/?utm_source=chatgpt.com__;!!Mih3wA!AAR1K4_7-YRpHIhCoNcISlY9IHwuoS7PP9hfTJS0zrcu9W_vYBG-dIv1Q5r73KAWq-9yd0mBXEfkNMcQN0CD$
> >) and the Lasker Lab<
> https://urldefense.com/v3/__https://laskerlab.org/?utm_source=chatgpt.com__;!!Mih3wA!AAR1K4_7-YRpHIhCoNcISlY9IHwuoS7PP9hfTJS0zrcu9W_vYBG-dIv1Q5r73KAWq-9yd0mBXEfkNPwLWRba$
> > at Scripps Research are seeking a joint postdoctoral researcher to
> investigate the structure of biomolecular condensates using structural
> (cryo-ET/SPA) and biophysical methods.
>
> Biomolecular condensates play critical roles in cellular organization,
> signaling, and disease pathology, yet their structural and mechanistic
> principles remain largely unresolved. Resolving these structures at high
> resolution will provide fundamental insights into their function and inform
> therapeutic strategies for diseases linked to condensate dysregulation. You
> can see our recent work here:
> https://urldefense.com/v3/__https://www.biorxiv.org/content/10.1101/2024.12.27.630454v1.full.pdf__;!!Mih3wA!AAR1K4_7-YRpHIhCoNcISlY9IHwuoS7PP9hfTJS0zrcu9W_vYBG-dIv1Q5r73KAWq-9yd0mBXEfkNHaAcZmG$
> .
>
> Scripps Research hosts state-of-the-art cryo-electron microscopy
> facilities, including Titan Krios, screening microscopes, and cryo-FIB/CLEM
> capabilities. The institute also offers a vibrant interdisciplinary
> environment with collaborative networks supporting advanced structural and
> biophysical research.
>
> If this opportunity interests you, please reach out to both Keren (
> klasker at scripps.edu) and me (dopark at scripps.edu) with your CV, including
> contact information for references.
>
> Best regards,
>
> Raphael Park
>
>
> Donghyun ?Raphael? Park, Ph.D.
> Assistant Professor
> Department of Integrative Structural & Computational Biology
> Scripps Research
> 10596 N Torrey Pines Rd
> <https://urldefense.com/v3/__https://www.google.com/maps/search/10596*N*Torrey*Pines*Rd?entry=gmail&source=g__;KysrKw!!Mih3wA!EN3OWSL4RxRU7T5z40CfWH8SqOHfuuv0HBJAuFkkramsp_or9vqcjZAy-QJ9N7eN-Cxei1UTUCy7R2fKCq462EKY$ >,
> MB 101
> La Jolla, CA 92037
> Phone: 858-784-9079
> Website:
> https://urldefense.com/v3/__https://www.the-park-lab.org/__;!!Mih3wA!AAR1K4_7-YRpHIhCoNcISlY9IHwuoS7PP9hfTJS0zrcu9W_vYBG-dIv1Q5r73KAWq-9yd0mBXEfkNBfQWHHe$
>
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> ------------------------------
>
> Message: 3
> Date: Wed, 3 Sep 2025 18:05:53 +0200
> From: Mazdak Radjainia <mazdak at cryoduck.com>
> To: 3dem at ncmir.ucsd.edu
> Subject: [3dem] Cryo-EM Specialist Position at Novartis (Basel)
> Message-ID:
>         <CALbLa9VzSgYgAUwRbwq0oyw4F=
> Dw+TR+f0GGbZZds0SgkDhDvQ at mail.gmail.com>
> Content-Type: text/plain; charset="utf-8"
>
> Dear colleagues,
>
> Novartis has an opening for a 'Cryo-EM Specialist' based in Basel. This is
> a fantastic team to work with, and I can highly recommend the environment
> and opportunities they offer. Researchers with strong expertise in cryo-EM
> are encouraged to apply.
>
> More details and application link:
> Job Posting on LinkedIn
> <
> https://urldefense.com/v3/__https://www.linkedin.com/posts/maryam-khoshouei-1ba44541_we-are-hiring-check-out-this-job-at-novartis-activity-7368380205775724545-2ao1?__;!!Mih3wA!B8WsxQCuczmV_RRaIzi0xRM0gZy60kZNo070FXaWe_mURXltH7H_sqf0pROUG9pTZ_X8uCA6gpWH9RVYql8$
> >
> Best wishes,
>
> *Mazdak* | cryoDuck B.V.
> Home <
> https://urldefense.com/v3/__http://cryoduck.com__;!!Mih3wA!B8WsxQCuczmV_RRaIzi0xRM0gZy60kZNo070FXaWe_mURXltH7H_sqf0pROUG9pTZ_X8uCA6gpWHWUiGqB8$
> > / Newsletter <
> https://urldefense.com/v3/__http://cryoduck.com/newsletter/__;!!Mih3wA!B8WsxQCuczmV_RRaIzi0xRM0gZy60kZNo070FXaWe_mURXltH7H_sqf0pROUG9pTZ_X8uCA6gpWHz19GwBY$
> > /
> Blog <
> https://urldefense.com/v3/__http://cryoduck.com/blog/__;!!Mih3wA!B8WsxQCuczmV_RRaIzi0xRM0gZy60kZNo070FXaWe_mURXltH7H_sqf0pROUG9pTZ_X8uCA6gpWH_7TrJ4Q$
> >
> +31610585016
> 5615EC 86 - Netherlands
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> End of 3dem Digest, Vol 217, Issue 3
> ************************************
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