[3dem] Merge particles from 2 different Relion directories

[Daniel Asarnow]

Hi Ioannis,
Softlinking and merging the star files (with different optic group names)
is a good plan - that is what I do.

However I believe it is also allowed to use absolute paths in particle star
files, or at least it used to be.

Best,
-da

On Tue, Aug 26, 2025 at 5:26 AM Ioannis Skalidis via 3dem <
3dem at ncmir.ucsd.edu> wrote:

> Hey all!
>
> I have two different tomo datasets which I processed in different
> directories (I know, a bad choice to begin with) with Relion 5 tomo. After
> alignment, classification, and selection (in their individual directories),
> I was thinking about merging them and then refine. Is there a
> straightforward way to do this? I thought about merging the particle lists
> and then softlinking everything as needed, but it would take a bit of time.
> Should I just reprocess one of the datasets in the relion directory of the
> other? Any advice?
>
> Thanks a lot!
> Ioannis.
>
>
>
>
> Dr. Ioannis Skalidis | Structural Biochemist | Twitter: @imjohnskal
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