[3dem] Workstation

Marin van Heel m.vanheel at imperial.ac.uk
Sat Nov 8 10:37:20 PST 2014


Dear Hernando,

Your system has virtually no disk space allocated. We tend to configure 
such systems with one SSD for all software and swapping area, and a 
large RAID array for the data processing. Since the raw data sets we 
work with nowadays easily exceed 1Tb, you will need 10-20 fold that 
amount of space for processing of each project. I would thus serious 
look into adding a 20+ Tbyte of local RAID array (as Steven also suggested).

Cheers

Marin


On 08/11/2014 00:07, Hernando J Sosa wrote:
>
> Dear EM users,
>
> We have some money to spend  (<10K) in a personal  workstation mainly 
> to be used for number crunching  and single particle analysis. I came 
> across  this system (see below) made by a company called Thinkmate.
>
> Does anybody have experience with this company?
>
> Any comments on the system ?
>
> As configured it has 64 cores (4 x 16) and 128 GB of RAM
>
> I chose AMD Opteron  over Intel as it seems to produce the best 
> price/performance but I may be wrong.
>
> Any comments suggestions are welcomed.
>
> Thanks
>
> Hernando
>
>
>
> _______________________________________________
> 3dem mailing list
> 3dem at ncmir.ucsd.edu
> https://mail.ncmir.ucsd.edu/mailman/listinfo/3dem


-- 
================================================================

     Prof Dr Ir Marin van Heel

     Professor of Cryo-EM Data Processing

     Leiden University
     NeCEN Building Room 05.27
     Einsteinweg 55
     2333 CC Leiden
     The Netherlands
      
     Tel. NL: +31(0)715271424 // Mobile NL: +31(0)652736618
     Skype:    Marin.van.Heel
     email:  marin.vanheel(A_T)gmail.com
     and:    mvh.office(A_T)gmail.com

----------------------------------------------

     Emeritus Professor of Structural Biology

     Imperial College London
     Faculty of Natural Sciences
     Biochemistry Building (Room 512)
     South Kensington Campus
     London SW7 2AZ,  UK
     email:  m.vanheel(A_T)ic.ac.uk

     Tel. UK:   +44(0)2075945316 //Mobile: +44(0)7941540625

----------------------------------------------
     Visiting Professor at:

     Laboratório Nacional de Nanotecnologia - LNNano
     CNPEM/ABTLuS, Campinas, Brazil
     Brazilian mobile phone  +55-19-99369051

------------------------------------------------------------------

I receive many emails per day and, although I try,
there is no guarantee that I will actually read each incoming email.
Moreover, our Spam filters can be strikt and sometimes make
legitimate emails disappear (try the gmail accounts, alternatively)

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ncmir.ucsd.edu/pipermail/3dem/attachments/20141108/ae1655c0/attachment-0001.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: not available
Type: image/png
Size: 191687 bytes
Desc: not available
URL: <http://mail.ncmir.ucsd.edu/pipermail/3dem/attachments/20141108/ae1655c0/attachment-0001.png>


More information about the 3dem mailing list