[3dem] PyTom
Friedrich Foerster
frido at salilab.org
Fri Aug 10 15:24:40 PDT 2012
dear colleagues,
i wanted to draw your attention to PyTom, our python approach to
tomogram processing. pros of our package are that it uses parallel
processing, scripting in python is easy, and web-based GUIs exist for the
most-common tasks (particle identification, subtomogram averaging, and
subtomogram classification; more info: Hrabe T, et al. (2012) PyTom: a
python-based toolbox for localization of macromolecules in
cryo-electron tomograms and subtomogram analysis. J. Struct. Biol.
178(2):177-188). Moreover, the package contains a hopefully useful
tutorial in html format and test data is available for download.
Download:
https://sourceforge.net/projects/pytom/
General Information:
http://www.biochem.mpg.de/en/rg/foerster/Content_Software/PyTom/index.html
Best regards
Friedrich Foerster
--
Dr. Friedrich Foerster
Max-Planck Institut fuer Biochemie
Am Klopferspitz 18
D-82152 Martinsried
Tel: +49 89 8578 2632
Fax: +49 89 8578 2641
www.biochem.mpg.de/foerster
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