New EMAN version 1.7 released
Steve Ludtke
stevel at blake.3dem.bioch.bcm.tmc.edu
Wed May 18 23:59:19 PDT 2005
We are happy to announce the release of EMAN 1.7, a major feature enhancement
and bugfix release. Major changes include:
* Major overhaul of parallelism infrastructure (runpar). Now uses
fileserver for both reads and writes in the cluster versions. Fault tolerance
has also improved. If a node dies during a run, the run will continue, and
simply stop using that node. Better job distribution to nodes.
* Binary release for AMD64, and better support for OSX (still imperfect).
* New program refine2d.py for generating reference-free class-averages from
a set of particles. Uses a combination of SVD and alignment. MUCH better than
startnrclasses.
* New program makeinitialmodel.py for constructing 3D models from blobs,
good for making random or deterministic shapes.
* Greatly expanded and improved AIRS software with Chimera bindings. This
includes tools for locating secondary structure in intermediate resolution maps
(ssehunter.py), docking crystal structures (foldhunter.py), and many other
useful tools.
* Support for both full and 1/2 maps for icosahedral reconstructions
As usual, EMAN can be downloaded from:
http://ncmi.bcm.tmc.edu/EMAN
We hope to make an official OSX binary available sometime in the next few weeks.
If upgrading from a previous version, please make sure to fully remove the old
version (rm -rf EMAN) before installing the new version. Please direct any
bug reports or questions to sludtke at bcm.tmc.edu.
----------------------------------------------------------------------------
Steven Ludtke, PhD | Baylor College of Medicine
sludtke at bcm.tmc.edu | Asst. Professor & Co-Director
stevel at alumni.caltech.edu | National Center For Macromolecular Imaging
V: (713)798-9020 | Dept of Biochemistry and Mol. Biol.
F: (713)798-1625 |
instant messenger: sludtke42 | Those who Do, Are
http://ncmi.bcm.tmc.edu/~stevel | The converse also applies
More information about the 3dem
mailing list