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Dear Colleagues,<br>
<br>
In the past few days our machine-learning team at <a
href="https://ariadne.ai">ariadne.ai</a> has worked on automated
segmentation/detection of virus particles in EM images.<br>
<br>
Please get in touch if <br>
- you would be interested in collaborating<br>
- a similar type of analysis could be useful for your virology
research<br>
- you have libraries of additional EM images of viruses to share
(any virus type/class, but in particular SARS-CoV-2)<br>
- you have any useful feedback on what to improve in the detection<br>
<br>
We are looking for collaborators that would like to work with us to
further improve the automated virus analysis, e.g. for automated
virus classification.<br>
The attached image shows automatically detected HSV virus particles
that have been segmented by our prototype algorithm without any
human intervention/annotation (image source:
<a class="moz-txt-link-freetext" href="https://figshare.com/articles/Untitled_Item/8131241/2">https://figshare.com/articles/Untitled_Item/8131241/2</a>) .<br>
<br>
Best,<br>
Adrian<br>
<img moz-do-not-send="false"
src="cid:part2.8715C7E2.5E125ABF@princeton.edu" alt=""
width="1536" height="1536"><br>
<br>
<br>
<div class="moz-cite-prefix">On 05.02.20 21:34, Adrian Wanner wrote:<br>
</div>
<blockquote type="cite"
cite="mid:1cd7a6ef-a460-5be1-79a7-64c2c379be30@princeton.edu">
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
Dear Colleagues,<br>
<br>
We just added <b>mitochondria cristae reconstruction</b> to <a
href="https://ariadne.ai/3dEMtrace" moz-do-not-send="true">3dEMtrace</a>,
the first online organelle segmentation service for volume
electron microscopy data. In addition to reconstruction of nuclei,
mitochondria, endoplasmic reticula and synaptic junctions we also
of custom workflow development for your structure of choice. <br>
<br>
Just go to <a href="https://ariadne.ai/3dEMtrace"
moz-do-not-send="true">https://ariadne.ai/3dEMtrace</a>, upload
your data and <a href="https://ariadne.ai" moz-do-not-send="true">ariadne.ai</a>
takes it from there. <br>
<br>
Best,
<p>Adrian Wanner</p>
<p>Follow us on <a href="https://twitter.com/ariadne_ai"
moz-do-not-send="true">twitter</a></p>
</blockquote>
<br>
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