[joel@localhost build]$ sudo cmake -DCUDA_ARCH=61 -DMPI_CXX_COMPILER=/usr/lib64/openmpi3/bin/mpicxx -DMPI_C_COMPILER=/usr/lib64/openmpi3/bin/mpicc .. -- The C compiler identification is GNU 4.8.5 -- The CXX compiler identification is GNU 4.8.5 -- Check for working C compiler: /bin/cc -- Check for working C compiler: /bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /bin/c++ -- Check for working CXX compiler: /bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- BUILD TYPE set to the default type: 'Release' -- Using provided CUDA_ARCH=61 -- CUDA enabled - Building CUDA-accelerated version of RELION -- Setting cpu precision to double -- Setting accelerated code precision to single -- Found CUDA: /usr/local/cuda (found version "10.1") -- Using cuda wrapper to compile.... -- Cuda version is >= 7.5 and single-precision build, enable double usage warning. -- Found MPI_C: /usr/lib64/openmpi3/lib/libmpi.so -- Found MPI_CXX: /usr/lib64/openmpi3/lib/libmpi_cxx.so;/usr/lib64/openmpi3/lib/libmpi.so -- MPI_INCLUDE_PATH : /usr/include/openmpi3-x86_64 -- MPI_LIBRARIES : /usr/lib64/openmpi3/lib/libmpi_cxx.so;/usr/lib64/openmpi3/lib/libmpi.so -- MPI_CXX_INCLUDE_PATH : /usr/include/openmpi3-x86_64 -- MPI_CXX_LIBRARIES : /usr/lib64/openmpi3/lib/libmpi_cxx.so;/usr/lib64/openmpi3/lib/libmpi.so -- CMAKE_C_COMPILER : /bin/cc -- CMAKE_CXX_COMPILER : /bin/c++ -- MPI_C_COMPILER : /usr/lib64/openmpi3/bin/mpicc -- MPI_CXX_COMPILER : /usr/lib64/openmpi3/bin/mpicxx -- CMAKE_CXX_COMPILER_ID : GNU -- CMAKE_C_COMPILER : /usr/lib64/openmpi3/bin/mpicc -- CMAKE_CXX_COMPILER : /usr/lib64/openmpi3/bin/mpicxx -- MPI_C_COMPILER : /usr/lib64/openmpi3/bin/mpicc -- MPI_CXX_COMPILER : /usr/lib64/openmpi3/bin/mpicxx -- Looking for XOpenDisplay in /usr/lib64/libX11.so -- Looking for XOpenDisplay in /usr/lib64/libX11.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Found X11: /usr/lib64/libX11.so -- Could NOT find FLTK (missing: FLTK_LIBRARIES FLTK_INCLUDE_DIR FLTK_FLUID_EXECUTABLE) -- No FLTK installation was found -- Found previously built non-system FLTK libraries that will be used. -- FLTK_INCLUDE_DIR: /usr/local/bin/relion/external/fltk/include -- FLTK_LIBRARIES: /usr/local/bin/relion/external/fltk/lib/libfltk.so -- Single-precision FFTW was required but NOT found -- Double-precision FFTW was required but NOT found -- Found previously built non-system single precision FFTW libraries that will be used. -- Found previously built non-system double precision FFTW libraries that will be used. -- Looking for sincos -- Looking for sincos - found -- Looking for __sincos -- Looking for __sincos - not found -- Found TIFF: /usr/lib64/libtiff.so (found version "4.0.3") BUILD_SHARED_LIBS = OFF -- Building static libs (larger build size and binaries) Running apps/CMakeLists.txt... -- CMAKE_BINARY_DIR:/usr/local/bin/relion/build TIFF FOUND -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Found OpenMP: -fopenmp OPENMP FOUND -- Configuring done -- Generating done -- Build files have been written to: /usr/local/bin/relion/build