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Following the question on the Titan RTX, I see that we can add an NVLink between two cards to potentially double the available memory.
<div class="">I am sure many would be interested to know if our beloved cryo-EM programs can take advantage of this natively or if it is not so simple. </div>
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<div class="">Best,<br class="">
<div class="">
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<span style="font-size: 12px;" class="">--<br class="">
Amedee des Georges, Ph.D. <br class="">
Assistant Professor, Structural Biology Initiative, CUNY Advanced Science Research Center<br class="">
Assistant professor of Chemistry & Biochemistry, City College of New York<br class="">
<a href="mailto:amedee.desgeorges@asrc.cuny.edu" class="">amedee.desgeorges@asrc.cuny.edu</a> - <a href="http://asrc.cuny.edu" class="">http://asrc.cuny.edu</a> - 212-413-3232</span></div>
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<blockquote type="cite" class="">
<div class="">
<div class=""><br class="">
Message: 1<br class="">
Date: Wed, 6 Feb 2019 19:02:10 +0000<br class="">
From: Jonathan Lefman <<a href="mailto:jlefman@nvidia.com" class="">jlefman@nvidia.com</a>><br class="">
To: Saikat Chowdhury <<a href="mailto:saikatbioinfo@gmail.com" class="">saikatbioinfo@gmail.com</a>><br class="">
Cc: "<a href="mailto:3dem@ncmir.ucsd.edu" class="">3dem@ncmir.ucsd.edu</a>" <<a href="mailto:3dem@ncmir.ucsd.edu" class="">3dem@ncmir.ucsd.edu</a>>,<br class="">
<span class="Apple-tab-span" style="white-space:pre"></span>"<a href="mailto:CCPEM@jiscmail.ac.uk" class="">CCPEM@jiscmail.ac.uk</a>" <<a href="mailto:CCPEM@jiscmail.ac.uk" class="">CCPEM@jiscmail.ac.uk</a>><br class="">
Subject: Re: [3dem] [ccpem] Titan RTX Vs RTX2080Ti<br class="">
<span class="Apple-tab-span" style="white-space:pre"></span><br class="">
<br class="">
Hi Saikat,<br class="">
<br class="">
Would you please let me know which application / functional component of cryo-EM data processing? I will do my best to provide guidance where I am able.<br class="">
<br class="">
Thank you.<br class="">
<br class="">
-Jon<br class="">
<br class="">
Jonathan Lefman<br class="">
Developer Relations Manager - Healthcare and Life Sciences<br class="">
NVIDIA<<a href="http://www.nvidia.com/" class="">http://www.nvidia.com/</a>><br class="">
<br class="">
<br class="">
<br class="">
From: 3dem <<a href="mailto:3dem-bounces@ncmir.ucsd.edu" class="">3dem-bounces@ncmir.ucsd.edu</a>> On Behalf Of Saikat Chowdhury<br class="">
Sent: Tuesday, February 5, 2019 9:43 PM<br class="">
To: <a href="mailto:3dem@ncmir.ucsd.edu" class="">3dem@ncmir.ucsd.edu</a><br class="">
Cc: <a href="mailto:CCPEM@jiscmail.ac.uk" class="">CCPEM@jiscmail.ac.uk</a><br class="">
Subject: Re: [3dem] [ccpem] Titan RTX Vs RTX2080Ti<br class="">
<br class="">
Hi cryo-EM community members,<br class="">
<br class="">
I would like to know if anyone is using or benchmarked the Titan RTX card for cryo-EM data processing?<br class="">
<br class="">
Is it worth the price of the card (almost twice the price of the RTX 2080Ti)?<br class="">
<br class="">
Thanks,<br class="">
-Saikat<br class="">
<br class="">
-SAIKAT CHOWDHURY, Ph.D<br class="">
Assistant Professor<br class="">
Dept. of Biochemistry and Cell Biology<br class="">
Stony Brook University<br class="">
CMM 144<br class="">
Stony Brook, NY 11794-5115<br class="">
(Joint appointment - Brookhaven National Laboratory)<br class="">
<br class="">
<br class="">
On Wed, Dec 5, 2018 at 1:56 PM Min, Xiaoshan <<a href="mailto:xmin@amgen.com" class="">xmin@amgen.com</a><<a href="mailto:xmin@amgen.com" class="">mailto:xmin@amgen.com</a>>> wrote:<br class="">
Dear Community,<br class="">
<br class="">
A couple weeks ago there were a couple of helpful discussions on the comparison between different GPUs. I am wondering if people can provide some insight into the newly announced Titan RTX
<a href="https://www.nvidia.com/en-us/titan/titan-rtx/" class="">https://www.nvidia.com/en-us/titan/titan-rtx/</a> The 24GB memory seems to be particularly appealing.<br class="">
<br class="">
Thanks,<br class="">
<br class="">
Xiaoshan<br class="">
<br class="">
<br class="">
Xiaoshan Min | Principal Scientist<br class="">
Amgen Inc.<br class="">
Department of Molecular Engineering<br class="">
1120 Veterans Blvd | South San Francisco, CA<br class="">
Ph. 6502442412 | <a href="mailto:xmin@amgen.com" class="">xmin@amgen.com</a><<a href="mailto:xmin@amgen.com" class="">mailto:xmin@amgen.com</a>><br class="">
<br class="">
<br class="">
Message: 2<br class="">
Date: Wed, 6 Feb 2019 14:06:09 -0500<br class="">
From: Saikat Chowdhury <<a href="mailto:saikatbioinfo@gmail.com" class="">saikatbioinfo@gmail.com</a>><br class="">
To: Jonathan Lefman <<a href="mailto:jlefman@nvidia.com" class="">jlefman@nvidia.com</a>><br class="">
Cc: "<a href="mailto:3dem@ncmir.ucsd.edu" class="">3dem@ncmir.ucsd.edu</a>" <<a href="mailto:3dem@ncmir.ucsd.edu" class="">3dem@ncmir.ucsd.edu</a>>,<br class="">
<span class="Apple-tab-span" style="white-space:pre"></span>"<a href="mailto:CCPEM@jiscmail.ac.uk" class="">CCPEM@jiscmail.ac.uk</a>" <<a href="mailto:CCPEM@jiscmail.ac.uk" class="">CCPEM@jiscmail.ac.uk</a>><br class="">
Subject: Re: [3dem] [ccpem] Titan RTX Vs RTX2080Ti<br class="">
<br class="">
Dear Jonathan,<br class="">
<br class="">
I am referring to the standard cryo-EM data processing packages like<br class="">
Relion-3-beta, Cryosparc 2, IMOD to name a few.<br class="">
<br class="">
Thanks,<br class="">
-Saikat<br class="">
<br class="">
On Wed, Feb 6, 2019 at 2:02 PM Jonathan Lefman <<a href="mailto:jlefman@nvidia.com" class="">jlefman@nvidia.com</a>> wrote:<br class="">
<br class="">
<blockquote type="cite" class=""><br class="">
*From:* 3dem <<a href="mailto:3dem-bounces@ncmir.ucsd.edu" class="">3dem-bounces@ncmir.ucsd.edu</a>> *On Behalf Of *Saikat Chowdhury<br class="">
*Sent:* Tuesday, February 5, 2019 9:43 PM<br class="">
*To:* <a href="mailto:3dem@ncmir.ucsd.edu" class="">3dem@ncmir.ucsd.edu</a><br class="">
*Cc:* <a href="mailto:CCPEM@jiscmail.ac.uk" class="">CCPEM@jiscmail.ac.uk</a><br class="">
*Subject:* Re: [3dem] [ccpem] Titan RTX Vs RTX2080Ti<br class="">
<br class="">
<br class="">
<br class="">
Hi cryo-EM community members,<br class="">
<br class="">
<br class="">
<br class="">
I would like to know if anyone is using or benchmarked the Titan RTX card<br class="">
for cryo-EM data processing?<br class="">
<br class="">
<br class="">
<br class="">
Is it worth the price of the card (almost twice the price of the RTX<br class="">
2080Ti)?<br class="">
<br class="">
<br class="">
<br class="">
Thanks,<br class="">
<br class="">
-Saikat<br class="">
<br class="">
<br class="">
<br class="">
*-SAIKAT CHOWDHURY, Ph.D*<br class="">
<br class="">
Assistant Professor<br class="">
<br class="">
Dept. of Biochemistry and Cell Biology<br class="">
<br class="">
Stony Brook University<br class="">
<br class="">
CMM 144<br class="">
<br class="">
Stony Brook, NY 11794-5115<br class="">
<br class="">
(Joint appointment - Brookhaven National Laboratory)<br class="">
<br class="">
<br class="">
</blockquote>
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