<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8">
</head>
<body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class="">
I’d like to follow up to this for those interested (or those who may be in the process of purchasing equipment),
<div class=""><br class="">
</div>
<div class="">We plan on posting the completed results and analysis at the end of August. We are still finishing a few of the test cases, and will begin to collate everything after.</div>
<div class=""><br class="">
</div>
<div class="">Thanks,</div>
<div class=""><br class="">
</div>
<div class="">Charlie<br class="">
<div class="">
<div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px;">
__<br class="">
Charles Bowman<br class="">
Bioinformatics Analyst<br class="">
Ward Group<br class="">
The Scripps Research Institute<br class="">
<a href="mailto:bowman@scripps.edu" class="">bowman@scripps.edu</a></div>
</div>
<div><br class="">
<blockquote type="cite" class="">
<div class="">On Aug 2, 2018, at 10:20 AM, Charles Bowman <<a href="mailto:bowman@scripps.edu" class="">bowman@scripps.edu</a>> wrote:</div>
<br class="Apple-interchange-newline">
<div class="">
<div style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class="">
Hi Thejusvi,
<div class=""><br class="">
</div>
<div class="">I am collating results now, I will update this thread when finished.</div>
<div class=""><br class="">
</div>
<div class="">The final benchmarks cover most available options (1080, 1080ti, K80, P40, P100, V100).</div>
<div class=""><br class="">
</div>
<div class="">Charlie<br class="">
<div class="">
<div style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">
__<br class="">
Charles Bowman<br class="">
Bioinformatics Analyst<br class="">
Ward Group<br class="">
The Scripps Research Institute<br class="">
<a href="mailto:bowman@scripps.edu" class="">bowman@scripps.edu</a></div>
</div>
<div class=""><br class="">
<blockquote type="cite" class="">
<div class="">On Aug 2, 2018, at 9:31 AM, Thejusvi Ganesh <<a href="mailto:tganesh@nanoimagingservices.com" class="">tganesh@nanoimagingservices.com</a>> wrote:</div>
<br class="Apple-interchange-newline">
<div class="">
<div dir="ltr" class="">Hi Charlie, I was wondering if you have competed the benchmark of the Dell nodes with the P100/V100 gpus?<br class="">
<div class="gmail_extra"><br clear="all" class="">
<div class="">
<div class="gmail_signature" data-smartmail="gmail_signature">
<div dir="ltr" class="">
<div class="">
<div dir="ltr" class=""><span style="font-family: Helvetica; font-size: 12px; line-height: normal;" class="">Thejusvi Ganesh<br class="">
Principal Systems Administrator<br style="font-family: Helvetica; font-size: 12px; line-height: normal;" class="">
</span><span style="font-family: Helvetica; font-size: 12px; line-height: normal;" class="">NanoImaging Services, Inc.</span><br style="font-family: Helvetica; font-size: 12px; line-height: normal;" class="">
<span style="font-family: Helvetica; font-size: 12px; line-height: normal;" class="">4940 Carroll Canyon Road, Suite 115</span><br style="font-family: Helvetica; font-size: 12px; line-height: normal;" class="">
<span style="font-family: Helvetica; font-size: 12px; line-height: normal;" class="">San Diego, CA 92121</span><br style="font-family: Helvetica; font-size: 12px; line-height: normal;" class="">
<span style="font-family: Helvetica; font-size: 12px; line-height: normal;" class=""><a href="tel:(888)%20675-8261" value="+18886758261" style="color:rgb(17,85,204)" target="_blank" class="">888-675-8261</a> phone</span><br style="font-family: Helvetica; font-size: 12px; line-height: normal;" class="">
<span style="font-family: Helvetica; font-size: 12px; line-height: normal;" class=""><a href="tel:(858)%20203-4594" value="+18582034594" style="color:rgb(17,85,204)" target="_blank" class="">858-203-4594</a> fax</span><br style="font-family: Helvetica; font-size: 12px; line-height: normal;" class="">
<span style="font-family: Helvetica; font-size: 12px; line-height: normal;" class=""><a href="mailto:tganesh@nanoimagingservices.com" target="_blank" class="">tganesh@nanoimagingservices.com</a></span><br class="">
</div>
</div>
</div>
</div>
</div>
<br class="">
<div class="gmail_quote">On Thu, Jun 14, 2018 at 10:25 AM, Charles Bowman <span dir="ltr" class="">
<<a href="mailto:bowman@scripps.edu" target="_blank" class="">bowman@scripps.edu</a>></span> wrote:<br class="">
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div style="word-wrap:break-word;line-break:after-white-space" class="">Hi Craig,
<div class=""><br class="">
</div>
<div class="">I’m currently working with Dell to benchmark RELION on various configurations of their C4140 nodes with P100 / V100 and NVLINK.</div>
<div class=""><br class="">
</div>
<div class="">I can update this thread when we are finished with the results.</div>
<div class=""><br class="">
</div>
<div class="">Best,</div>
<div class="">Charlie</div>
<div class="">
<div class="">
<div style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px;" class="">
__<span class="HOEnZb"><font color="#888888" class=""><br class="">
Charles Bowman<br class="">
Bioinformatics Analyst<br class="">
Ward Group<br class="">
The Scripps Research Institute<br class="">
<a href="mailto:bowman@scripps.edu" target="_blank" class="">bowman@scripps.edu</a></font></span></div>
</div>
<div class="">
<div class="h5">
<div class=""><br class="">
<blockquote type="cite" class="">
<div class="">On Jun 12, 2018, at 8:22 PM, Craig Yoshioka <<a href="mailto:yoshiokc@OHSU.EDU" target="_blank" class="">yoshiokc@OHSU.EDU</a>> wrote:</div>
<br class="m_6537617640017291123Apple-interchange-newline">
<div class="">
<div class="">Hi all,<br class="">
<br class="">
Does anyone have any Relion benchmark #s on Volta GPUs? I’m also interested in multi-GPU gains using NVLink.<br class="">
<br class="">
Thanks,<br class="">
-Craig<br class="">
<br class="">
______________________________<wbr class="">_________________<br class="">
3dem mailing list<br class="">
<a href="mailto:3dem@ncmir.ucsd.edu" target="_blank" class="">3dem@ncmir.ucsd.edu</a><br class="">
<a href="https://mail.ncmir.ucsd.edu/mailman/listinfo/3dem" target="_blank" class="">https://mail.ncmir.ucsd.edu/<wbr class="">mailman/listinfo/3dem</a><br class="">
</div>
</div>
</blockquote>
</div>
<br class="">
</div>
</div>
</div>
</div>
<br class="">
______________________________<wbr class="">_________________<br class="">
3dem mailing list<br class="">
<a href="mailto:3dem@ncmir.ucsd.edu" class="">3dem@ncmir.ucsd.edu</a><br class="">
<a href="https://mail.ncmir.ucsd.edu/mailman/listinfo/3dem" rel="noreferrer" target="_blank" class="">https://mail.ncmir.ucsd.edu/<wbr class="">mailman/listinfo/3dem</a><br class="">
<br class="">
</blockquote>
</div>
<br class="">
</div>
</div>
</div>
</blockquote>
</div>
<br class="">
</div>
</div>
</div>
</blockquote>
</div>
<br class="">
</div>
</body>
</html>