<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi Mike,<div class="">Try dm2mrc() in the IMOD package.</div><div class="">-James</div><div class=""><br class=""></div><div class=""><a href="http://bio3d.colorado.edu/imod/doc/man/dm2mrc.html" class="">http://bio3d.colorado.edu/imod/doc/man/dm2mrc.html</a></div><div class=""><br class=""><div class="">
<div class=""><div class="">James Bouwer, Ph.D.</div><div class="">Physicist - Manager Cryo-Electron Microscopy Facility</div><div class="">University of California, San Diego<br class="">Department of Chemistry and Biochemistry</div><div class="">Bonner Hall 1510 <br class="">9500 Gilman Drive<br class="">La Jolla, CA, 92093-0378<br class="">(858) 822-6718</div><div class=""><a href="mailto:jbouwer@ucsd.edu" class="">jbouwer@ucsd.edu</a></div></div><div class=""><br class=""></div><br class="Apple-interchange-newline">
</div>
<br class=""><div><blockquote type="cite" class=""><div class="">On Sep 22, 2016, at 8:20 AM, Mike Strauss <<a href="mailto:mikestrauss13@crystal.harvard.edu" class="">mikestrauss13@crystal.harvard.edu</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><meta http-equiv="Content-Type" content="text/html; charset=utf-8" class=""><div dir="ltr" class="">Have you tried the EMAN suite? Maybe e2proc2d.py ?<div class=""><br class=""></div><div class="">mike</div></div><div class="gmail_extra"><br class=""><div class="gmail_quote">On Thu, Sep 22, 2016 at 9:57 AM, michael schatz <span dir="ltr" class=""><<a href="mailto:michael@imagescience.de" target="_blank" class="">michael@imagescience.de</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div bgcolor="#FFFFFF" text="#000000" class="">
Hi Eric,<br class="">
<br class="">
Did you try em2em (<a href="https://www.imagescience.de/download.html#em2em" target="_blank" class="">https://www.imagescience.de/<wbr class="">download.html#em2em</a>)?<br class="">
But I am not sure if em2em can handle your type of DM4 images.<br class="">
<br class="">
Regards<br class="">
Michael<br class="">
<br class="">
==<br class="">
<br class="">
Eric Gilles Hanssen wrote:<br class="">
<blockquote type="cite" class="">
<div class=""><span class=""><p class="MsoNormal"><a name="m_-1649957333433014665__MailEndCompose" class=""><span style="color:#1f497d" class="">Little
precisions:<br class="">
- have tried imod dm2mrc. Not working for me<u class=""></u><u class=""></u></span></a></p><p class="MsoNormal"><span style="color:#1f497d" class="">- The image
stacks are K2 dose fractionation for single particles, not
sure if the format is the same then a tilt series for
tomography.
<u class=""></u><u class=""></u></span></p><p class="MsoNormal"><span style="color:#1f497d" class=""><u class=""></u> <u class=""></u></span></p><p class="MsoNormal"><span style="color:#1f497d" class="">Regards<u class=""></u><u class=""></u></span></p><p class="MsoNormal"><span style="color:#1f497d" class="">Eric<u class=""></u><u class=""></u></span></p><p class="MsoNormal"><span style="color:#1f497d" class=""><u class=""></u> <u class=""></u></span></p>
<br class="">
<span style="color:#1f497d" class=""><u class=""></u> <u class=""></u></span>
</span><div class="">
<div style="border:none;border-top:solid #b5c4df 1.0pt;padding:3.0pt 0cm 0cm 0cm" class=""><p class="MsoNormal"><b class=""><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"" lang="EN-US" class="">From:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"" lang="EN-US" class=""> 3dem [<a href="mailto:3dem-bounces@ncmir.ucsd.edu" target="_blank" class="">mailto:3dem-bounces@ncmir.<wbr class="">ucsd.edu</a>]
<b class="">On Behalf Of </b>Eric Gilles Hanssen<span class=""><br class="">
<b class="">Sent:</b> Thursday, 22 September 2016 1:34 PM<br class="">
<b class="">To:</b> <a href="mailto:3dem@ncmir.ucsd.edu" target="_blank" class="">3dem@ncmir.ucsd.edu</a><br class="">
<b class="">Subject:</b> [3dem] K2 files<u class=""></u><u class=""></u></span></span></p>
</div>
</div><span class=""><p class="MsoNormal"><u class=""></u> <u class=""></u></p><p class="MsoNormal">Hi all, <u class=""></u><u class=""></u></p><p class="MsoNormal">I have a fair amount of .dm4 image stacks
from a K2 camera. they are all too big (2.7GB) for my windows
32bit version of DM (yes i know I should upgrade to 64 bits,
soon) . I would like to open these images with MOTIONCORR on
my linux system.
<u class=""></u><u class=""></u></p><p class="MsoNormal">Is there any way of transforming the .dm4
in .mrc stacks without DM?<br class="">
regards<u class=""></u><u class=""></u></p><p class="MsoNormal">Eric<u class=""></u><u class=""></u></p>
</span></div>
</blockquote>
<br class="">
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