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Dear Fabien,<br>
<br>
in principle, this can be done with Scipion
(<a class="moz-txt-link-freetext" href="http://scipion.cnb.csic.es/docs/bin/view/TWiki/WebHome">http://scipion.cnb.csic.es/docs/bin/view/TWiki/WebHome</a>). Scipion is
not officially released yet (although a beta version will be soon).
Scipion converts the 2D alignment parameters produced by Relion into
alignment parameters that Xmipp RCT can use. Once it is public, we
will be happy to help you installing and using the framework.<br>
<br>
Kind regards, Carlos Oscar<br>
<br>
<div class="moz-cite-prefix">On 04/09/2015 09:41 PM, Fabien
Alexandre Bergeret, Dr wrote:<br>
</div>
<blockquote
cite="mid:6C10AD2542B54246922188FE3395F8877EA8DB4A@exmbx2010-8.campus.MCGILL.CA"
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<div style="direction: ltr;font-family: Tahoma;color:
#000000;font-size: 10pt;">Dear 3dem,
<div><br>
</div>
<div>I am currently doing random conical tilt reconstructions
with Xmipp3.1. So far, 2D classifications with CL2D gave me
the best results. I've also made 2D classifications of my
untilted particles with Relion and it gave me very good
classifications (nice classes and nice particles inside the
classes).</div>
<div>I would like to use the 2D classifications from Relion for
doing the RCT reconstructions with Xmipp. I don't know if it
is possible and if yes how? My concerns are for example about
the difference of particles numbering between Xmipp and Relion
and the differences between the metafile formats.</div>
<div>Any help and suggestions are welcome ;)</div>
<div>Thanks in advance.</div>
<div>Best,</div>
<div>Fabien<br>
<div><br>
</div>
<div><br>
</div>
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<br>
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<br>
<pre class="moz-signature" cols="72">--
------------------------------------------------------------------------
Carlos Oscar Sánchez Sorzano e-mail: <a class="moz-txt-link-abbreviated" href="mailto:coss@cnb.csic.es">coss@cnb.csic.es</a>
Biocomputing unit <a class="moz-txt-link-freetext" href="http://biocomp.cnb.csic.es">http://biocomp.cnb.csic.es</a>
National Center of Biotechnology (CSIC)
c/Darwin, 3
Campus Universidad Autónoma (Cantoblanco) Tlf: 34-91-585 4510
28049 MADRID (SPAIN) Fax: 34-91-585 4506
------------------------------------------------------------------------
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