<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Hi All,<div><span class="Apple-tab-span" style="white-space:pre"> </span>In some of my reconstruction efforts using etomo, the cross-correlation step does not result in good pre-alignment. I can fix this with Midas, but I do not know how to use the resulting fixed stack for further reconstruction steps. I know that there is a way to do this, but I have not been successful in figuring it out. Can someone please tell me how to do it? TIA.<br><div> <span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; font-size: medium; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div><span class="Apple-tab-span" style="white-space: pre; "> </span>Yours,</div><div><span class="Apple-tab-span" style="white-space: pre; "> </span>Bill</div><div><br></div></div></span><br class="Apple-interchange-newline"> </div><br></div></body></html>