[3dem] Workshop Announcement: Machine Learning approaches in High Resolution Microscopy Imaging at BIBM 2018

White, Tommi A. whiteto at missouri.edu
Mon Sep 17 09:42:45 PDT 2018


Dear Microscopists, Image Analysts, and machine learning enthusiasts,
We will be hosting a day-long workshop on "Machine Learning approaches in High Resolution Microscopy Imaging" (MLHRM 2018 - http://www.mlhrm.net/) at the 2018 IEEE International Conference on Bioinformatics and Biomedicine December 3-6, 2018 in Madrid, Spain (http://orienta.ugr.es/bibm2018/).
This workshop aims to bring the researchers from computational and imaging fields together to focus on the computational approaches for construction and analysis in high resolution imaging modalities. Special emphasis will be on the applications of deep learning and other machine learning methods in imaging modalities such as cryo-electron microscopy, FIB-SEM tomography, and fluorescence super-resolution microscopy.
Topics include:

  *   Noise reduction in electron microscopy (EM) & super-resolution microscopy (SRM) modalities
  *   Signal detection and image reconstruction in SRM
  *   Image segmentation in EM modalities
  *   Image classification in EM modalities and SRM
  *   3D reconstruction methods and pipelines in cryo-EM
  *   Characterization of single molecule structure using machine learning approaches
  *   Applications of high resolution microscopy in precision medicine
  *   Applications in single molecule tracking, multiphoton imaging

Original contributions in applications of deep learning and other machine learning methods in high resolution microscopy including but not limited to noise reduction, detection, segmentation, classification, and reconstruction of 2D and 3D models, as well as new approaches in 3D reconstruction of single molecules are welcome. Contributions regarding other related modalities and automated analysis methods such as single molecule tracking, multiphoton imaging, and combining electron microscopy (EM) with super-resolution microscopy (STORM/PALM) will also be considered for inclusion in the workshop program.
Please submit a full-length original and unpublished research contribution (up to 6 pages in IEEE 2-column format) through the online submission system.
*        Formatting instructions for paper submission are available here: http://www.ieee.org/conferences_events/conferences/publishing/templates.html
*        Paper submission deadline has been extended to October 5th, 2018 and submissions can be made here: https://wi-lab.com/cyberchair/2018/bibm18/index.php

We look forward to seeing you in Madrid!  Please contact us with any questions (whiteto at missouri.edu<mailto:whiteto at missouri.edu>).

Dr. Tommi White, Electron Microscopy Core & Department of Biochemistry, University of Missouri, USA.
Dr. Filiz Bunyak, Department of Electrical Engineering and Computer Science, University of Missouri, USA.
Dr. Ilker Ersoy, Informatics Institute, Department of Pathology and Anatomical Sciences, University of Missouri, USA.

Tommi A. White, Ph.D.
Assistant Professor of Biochemistry
Director, Electron Microscopy Core Facility
University of Missouri
W117 Veterinary Medicine Building
1600 East Rollins Street
Columbia, MO 65211
573-882-8304
WhiteTo at missouri.edu<mailto:WhiteTo at missouri.edu>
http://emc.missouri.edu<http://emc.missouri.edu/>

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