[3dem] density threshold calculator

[Carlos Oscar Sánchez Sorzano]

Dear Joanna,

you may find useful the program xmipp_volume_segment 
(http://xmipp.cnb.csic.es/twiki/bin/view/Xmipp/Segment). If you need to 
incorporate it into your own program, the source code is accessible.

Kind regards, Carlos Oscar

On 17/05/2011 16:57, Joanna Kasprzak wrote:
> Hi,
>
> Could you please tell me is is possible to calculate a density threshold
> value
> for a particular complex volume?
>
> Eg. Complex A has a volume of 120 000 A3 and I want to know a density
> threshold value of a density map which will describe me a shape
> corresponding to
> this volume?
>
> Ideally I would like to find a method/algorithm easy to
> implement/incorporate with my computer program?
>
> Looking forward to hearing from you. Thanks for any help in advance!
>
> best regads,
>
> Joanna
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>

-- 
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Carlos Oscar Sánchez Sorzano                  e-mail:   coss at cnb.csic.es
Biocomputing unit                             http://biocomp.cnb.csic.es
National Center of Biotechnology (CSIC)
c/Darwin, 3
Campus Universidad Autónoma (Cantoblanco)     Tlf: 34-91-585 4510
28049 MADRID (SPAIN)                          Fax: 34-91-585 4506
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