Announcement of new services from the EBI-MSD Group

emdep emdep at ebi.ac.uk
Wed Jun 19 02:00:49 PDT 2002


  ** Announcement of New Services to the PDB **

  # Secondary Structure Matching
    a tool for protein structure comparison
    URL : http://www.ebi.ac.uk/msd-srv/ssm
    Author: Eugene Krissinel <keb at ebi.ac.uk>  
    This is an interactive service for comparing protein structures in 3D
    based on a new algorithm for common subgraph isomorphism
    
  # Hetgroup interface for accessing the ligands and small molecule 
    dictionary of compounds found in the PDB 
    URL: http://www.ebi.ac.uk/msd-srv/chempdb     
    Author: Dimitris Dimitropoulos <dimitris at ebi.ac.uk>     
    An interface to an MSD reference data warehouse containing a
    consistent and enriched library of all the small molecules and 
    monomers that are refered in any macromolecular structure.


 ** Please Note as of today (Wed Jun 19 2002) the following EBI/MSD 
    services were moved from an SGI server to a SUN server.
    http://oca.ebi.ac.uk/      Integrates data query form for the PDB
    http://pqs.ebi.ac.uk/      Protein Quaternary Structure Query Form
    http://autodep.ebi.ac.uk/  PDB deposition form
    http://capri.ebi.ac.uk/    Home page for protein-protein docking 
                               for structure prediction
    http://iims.ebi.ac.uk/     Some aspects of Electron Microscopy
                               data model (Home Page:
  http://www.ebi.ac.uk/msd/MSDProjects/IIMShome.html)

  We would welcome feedback to msd at ebi.ac.uk on any problems
  user may encounter during this change over period. This weeks
  PDB update is the first under the new operating system.

  Also note that 

    - the service http://relibase.ebi.ac.uk/
      from 1-July-2002 will be temporarily directed to 
         http://relibase.ccdc.cam.ac.uk/
      until a linux version is re-instated at the EBI.

    - the service http://www.ebi.ac.uk:80/dali/ is in the process
      of a port from SGI to Linux and will be maintained after
      1-July-2002 by the MSD group.




Janet Roser
Outreach Co-ordinator EBI-MSD
roser at ebi.ac.uk
+44 (0) 1223 492510


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 Macromolecular Structure Database
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______________________________________________________________________





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